RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 SMRP1Q8NCR6 262 aa12.02□□□□□ -0.49
TRAV4-201ENST00000390426 VN1R2Q8NFZ6 395 aa12.02□□□□□ -0.49
TRAV4-201ENST00000390426 HELQQ8TDG4 1101 aa12.02□□□□□ -0.49
TRAV4-201ENST00000390426 OXER1Q8TDS5 423 aa12.02□□□□□ -0.49
TRAV4-201ENST00000390426 PUF60Q9UHX1 559 aaKnown RBP12.02□□□□□ -0.49
TRAV4-201ENST00000390426 MUTYHQ9UIF7 546 aa12.02□□□□□ -0.49
TRAV4-201ENST00000390426 LZTS1Q9Y250 596 aa12.02□□□□□ -0.49
TRAV4-201ENST00000390426 USP15Q9Y4E8 981 aaPredicted RBP12.02□□□□□ -0.49
TRAV4-201ENST00000390426 PLXNA4Q9HCM2 1894 aa12.02□□□□□ -0.49
TRAV4-201ENST00000390426 A0A0U1RQF3 1178 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 CCNT1O60563 726 aaKnown RBP12.01□□□□□ -0.49
TRAV4-201ENST00000390426 PFKFB2O60825 505 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 MAFO75444 373 aaPredicted RBP12.01□□□□□ -0.49
TRAV4-201ENST00000390426 CTDNEP1O95476 244 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 EOMESO95936 686 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 ATF7P17544 494 aaPredicted RBP12.01□□□□□ -0.49
TRAV4-201ENST00000390426 XBP1P17861 261 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 NPEPPSP55786 919 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 CDC42EP1Q00587 391 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 KRT17Q04695 432 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 C1QBPQ07021 282 aaKnown RBP12.01□□□□□ -0.49
TRAV4-201ENST00000390426 LONRF3Q496Y0 759 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 PDE12Q6L8Q7 609 aaKnown RBP12.01□□□□□ -0.49
TRAV4-201ENST00000390426 PIK3AP1Q6ZUJ8 805 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 TMC7Q7Z402 723 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 NEK8Q86SG6 692 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
TRAV4-201ENST00000390426 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
TRAV4-201ENST00000390426 FAM20AQ96MK3 541 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 NLRP4Q96MN2 994 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 CDCA3Q99618 268 aaPredicted RBP12.01□□□□□ -0.49
TRAV4-201ENST00000390426 TCF25Q9BQ70 676 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 APOL5Q9BWW9 433 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 ENTPD7Q9NQZ7 604 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 DACT1Q9NYF0 836 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 SPG21Q9NZD8 308 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 ORC3Q9UBD5 711 aaPredicted RBP12.01□□□□□ -0.49
TRAV4-201ENST00000390426 VAV3Q9UKW4 847 aa12.01□□□□□ -0.49
TRAV4-201ENST00000390426 HIDE1A8MVS5 230 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 NT5C1B-RDH14C9J2C7 533 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 MARCH6O60337 910 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 SFPQP23246 707 aaKnown RBP eCLIP12□□□□□ -0.49
TRAV4-201ENST00000390426 PPM1AP35813 382 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 QARSP47897 775 aaKnown RBP12□□□□□ -0.49
TRAV4-201ENST00000390426 AK2P54819 239 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 PPP2R5CQ13362 524 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 EARS2Q5JPH6 523 aaKnown RBP12□□□□□ -0.49
TRAV4-201ENST00000390426 TWF2Q6IBS0 349 aaKnown RBP12□□□□□ -0.49
TRAV4-201ENST00000390426 PPP4R3AQ6IN85 833 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 LLGL2Q6P1M3 1020 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 SLC39A11Q8N1S5 342 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 HAS1Q92839 578 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 LPPQ93052 612 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 INO80BQ9C086 356 aaPredicted RBP12□□□□□ -0.49
TRAV4-201ENST00000390426 KCNMB3Q9NPA1 279 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 CYP26B1Q9NR63 512 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 CHST12Q9NRB3 414 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 BMP2KQ9NSY1 1161 aaPredicted RBP12□□□□□ -0.49
TRAV4-201ENST00000390426 WRAP73Q9P2S5 460 aaPredicted RBP12□□□□□ -0.49
TRAV4-201ENST00000390426 PIN4Q9Y237 131 aaKnown RBP12□□□□□ -0.49
TRAV4-201ENST00000390426 ARIH1Q9Y4X5 557 aaPredicted RBP12□□□□□ -0.49
TRAV4-201ENST00000390426 STK36Q9NRP7 1315 aa12□□□□□ -0.49
TRAV4-201ENST00000390426 WDR81Q562E7 1941 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 LOC730098B7Z3J9 87 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 P4HBP07237 508 aaKnown RBP11.99□□□□□ -0.49
TRAV4-201ENST00000390426 GCFC2P16383 781 aaKnown RBP11.99□□□□□ -0.49
TRAV4-201ENST00000390426 CA8P35219 290 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 TECP42680 631 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 PHKA2P46019 1235 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 BCAR1P56945 870 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
TRAV4-201ENST00000390426 EPHA7Q15375 998 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 HERC4Q5GLZ8 1057 aaPredicted RBP11.99□□□□□ -0.49
TRAV4-201ENST00000390426 NCAPH2Q6IBW4 605 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 CATSPER4Q7RTX7 472 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 ZNF410Q86VK4 478 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 NECAB1Q8N987 351 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 TMEM143Q96AN5 459 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 RPGRIP1Q96KN7 1286 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 CEP170P1Q96L14 293 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 JPH2Q9BR39 696 aaPredicted RBP11.99□□□□□ -0.49
TRAV4-201ENST00000390426 PHF7Q9BWX1 381 aaPredicted RBP11.99□□□□□ -0.49
TRAV4-201ENST00000390426 NGRNQ9NPE2 291 aaKnown RBP11.99□□□□□ -0.49
TRAV4-201ENST00000390426 RGL1Q9NZL6 768 aa11.99□□□□□ -0.49
TRAV4-201ENST00000390426 FSD2A1L4K1 749 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 MEIS3P2A8K0S8 358 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 DKC1O60832 514 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRAV4-201ENST00000390426 BAG4O95429 457 aaKnown RBP11.98□□□□□ -0.49
TRAV4-201ENST00000390426 LARGE1O95461 756 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 SRGAP2CP0DJJ0 459 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 FDPSP14324 419 aaKnown RBP11.98□□□□□ -0.49
TRAV4-201ENST00000390426 ALDH7A1P49419 539 aaKnown RBP11.98□□□□□ -0.49
TRAV4-201ENST00000390426 FOSBP53539 338 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 POLGP54098 1239 aaPredicted RBP11.98□□□□□ -0.49
TRAV4-201ENST00000390426 NR5A1Q13285 461 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 KCNC3Q14003 757 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 CTTNQ14247 550 aaKnown RBP11.98□□□□□ -0.49
TRAV4-201ENST00000390426 ANKRD1Q15327 319 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 ANKRD54Q6NXT1 300 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms