RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 CPA1P15085 419 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 GCFC2P16383 781 aaKnown RBP9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 NUBP1P53384 320 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 POLGP54098 1239 aaPredicted RBP9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 ERVFC1P60507 584 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 PSMC5P62195 406 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 NHLH1Q02575 133 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 RNASELQ05823 741 aaKnown RBP9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 SIGLEC14Q08ET2 396 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 NONOQ15233 471 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 PCBP1Q15365 356 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 NTRK3Q16288 839 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 TWF2Q6IBS0 349 aaKnown RBP9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 ELMSAN1Q6PJG2 1045 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 BLIDQ8IZY5 108 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 MRPL43Q8N983 215 aaKnown RBP9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 DAGLBQ8NCG7 672 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 URGCPQ8TCY9 931 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 FAM20AQ96MK3 541 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 SLKQ9H2G2 1235 aaPredicted RBP9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 UNC45AQ9H3U1 944 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 DDX25Q9UHL0 483 aaKnown RBP9.34□□□□□ -0.91
TRBV6-1-201ENST00000390353 MYO7AQ13402 2215 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 CCDC194A0A1B0GVG4 234 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 DDX11L8A8MPP1 907 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 GAS2O43903 313 aaKnown RBP9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 ZNF862O60290 1169 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 EIF5BO60841 1220 aaKnown RBP9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 MAFO75444 373 aaPredicted RBP9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 CA8P35219 290 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 MTHFRP42898 656 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 PHKA2P46019 1235 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 MRE11P49959 708 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 CCT2P78371 535 aaKnown RBP9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 NCBP1Q09161 790 aaKnown RBP9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 MTMR3Q13615 1198 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 TARBP2Q15633 366 aaKnown RBP9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 PTPN21Q16825 1174 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 MTERF2Q49AM1 385 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 OTUD6AQ7L8S5 288 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 CATSPER4Q7RTX7 472 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 ALYREFQ86V81 257 aaKnown RBP9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 PPFIBP1Q86W92 1011 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 UBALD2Q8IYN6 164 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 SLC39A11Q8N1S5 342 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 FBXL6Q8N531 539 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 HELQQ8TDG4 1101 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 WASF1Q92558 559 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 TM6SF1Q9BZW5 370 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 ADAM7Q9H2U9 754 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 KANSL3Q9P2N6 904 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 SUCLA2Q9P2R7 463 aaPredicted RBP9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 DPP7Q9UHL4 492 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 PIN4Q9Y237 131 aaKnown RBP9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 PCDHGC5Q9Y5F6 944 aa9.33□□□□□ -0.92
TRBV6-1-201ENST00000390353 IGKV6-21A0A0C4DH24 114 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 C2orf71A6NGG8 1288 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 SPDYE4A6NLX3 237 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 RBAK-RBAKDNI3L0D1 243 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 TBX3O15119 743 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 ZNF623O75123 536 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 ZC3H11AO75152 810 aaKnown RBP eCLIP9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 RFC5P40937 340 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 QARSP47897 775 aaKnown RBP9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 BCAR1P56945 870 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 KCNC3Q14003 757 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 UGCGQ16739 394 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 NOMO2Q5JPE7 1267 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 CLLU1OSQ5K130 101 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 ATAT1Q5SQI0 421 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 LLGL2Q6P1M3 1020 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 LRRC55Q6ZSA7 311 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 DDX53Q86TM3 631 aaKnown RBP9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 ZNF598Q86UK7 904 aaKnown RBP9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 RHPN2Q8IUC4 686 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 SLFN12Q8IYM2 578 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 PLCD3Q8N3E9 789 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 CNNM3Q8NE01 707 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 VN1R2Q8NFZ6 395 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 TCP11Q8WWU5 503 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 EMILIN2Q9BXX0 1053 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 S1PR5Q9H228 398 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 NCOA5Q9HCD5 579 aaKnown RBP9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 BRMS1Q9HCU9 246 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 UBN1Q9NPG3 1134 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 CYP26B1Q9NR63 512 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 SSX2IPQ9Y2D8 614 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 IRAK3Q9Y616 596 aa9.32□□□□□ -0.92
TRBV6-1-201ENST00000390353 CNTNAP2Q9UHC6 1331 aa9.31□□□□□ -0.92
TRBV6-1-201ENST00000390353 A0A087WZ62 844 aa9.31□□□□□ -0.92
TRBV6-1-201ENST00000390353 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.31□□□□□ -0.92
TRBV6-1-201ENST00000390353 HIDE1A8MVS5 230 aa9.31□□□□□ -0.92
TRBV6-1-201ENST00000390353 ASAP2O43150 1006 aa9.31□□□□□ -0.92
TRBV6-1-201ENST00000390353 NR1I2O75469 434 aa9.31□□□□□ -0.92
TRBV6-1-201ENST00000390353 BAG4O95429 457 aaKnown RBP9.31□□□□□ -0.92
TRBV6-1-201ENST00000390353 TDP2O95551 362 aa9.31□□□□□ -0.92
TRBV6-1-201ENST00000390353 CXCL14O95715 111 aa9.31□□□□□ -0.92
TRBV6-1-201ENST00000390353 P4HBP07237 508 aaKnown RBP9.31□□□□□ -0.92
TRBV6-1-201ENST00000390353 PPP2R5CQ13362 524 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms