RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 EPS8L3Q8TE67 593 aaKnown RBP15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 DNAJC9Q8WXX5 260 aa15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 NSUN4Q96CB9 384 aaKnown RBP15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 SUCLA2Q9P2R7 463 aaPredicted RBP15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 LAMB2P55268 1798 aa15.83■□□□□ 0.13
VPS9D1-201ENST00000389386 TM4SF1P30408 202 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 AMPD3Q01432 767 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 LRRC63Q05C16 580 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 MGAT5Q09328 741 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 DYNC1I2Q13409 638 aaKnown RBP15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 CACNA1SQ13698 1873 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 AUHQ13825 339 aaKnown RBP15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 ZDHHC24Q6UX98 284 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 BTNL9Q6UXG8 535 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 PEX26Q7Z412 305 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 GUF1Q8N442 669 aaKnown RBP15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 DYDC1Q8WWB3 177 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 TRAPPC9Q96Q05 1148 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 STMN4Q9H169 189 aaPredicted RBP15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 VCXQ9H320 206 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 ANAPC4Q9UJX5 808 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 DBR1Q9UK59 544 aaKnown RBP15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 RPTORQ8N122 1335 aa15.83■□□□□ 0.12
VPS9D1-201ENST00000389386 DDAH1O94760 285 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 ADRA2BP18089 450 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 SLCO1A2P46721 670 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 PLTPP55058 493 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 ASIC2Q16515 512 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 FOXB2Q5VYV0 432 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 EXOC3L1Q86VI1 746 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 NUDCD1Q96RS6 583 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 CCDC113Q9H0I3 377 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 SEMA4AQ9H3S1 761 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 G3BP2Q9UN86 482 aaKnown RBP15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 PDLIM1O00151 329 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 SERPINB2P05120 415 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 PTDSS1P48651 473 aaKnown RBP15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 PTENP60484 403 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 LMNB2Q03252 620 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 TSNAXIP1Q2TAA8 658 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 PRR5LQ6MZQ0 368 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 IRGCQ6NXR0 463 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 TAOK1Q7L7X3 1001 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 LONP2Q86WA8 852 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 DTNBP1Q96EV8 351 aa15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 TTC7AQ9ULT0 858 aaPredicted RBP15.82■□□□□ 0.12
VPS9D1-201ENST00000389386 RNASELQ05823 741 aaKnown RBP15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 CCDC15Q0P6D6 951 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 GRIK5Q16478 980 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 HHATQ5VTY9 493 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 RNF43Q68DV7 783 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 ANKRD23Q86SG2 305 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 DNAAF5Q86Y56 855 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 FBXO25Q8TCJ0 367 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 MGARPQ8TDB4 240 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 UCMAQ8WVF2 138 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 FGD4Q96M96 766 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 LRMDAQ9H2I8 198 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 TCP11L1Q9NUJ3 509 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 DAAM1Q9Y4D1 1078 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 FGGP02679 453 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 FAM163BP0C2L3 166 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 IMPDH2P12268 514 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 DR1Q01658 176 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 PTK2Q05397 1052 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 FAM13CQ8NE31 585 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 UHMK1Q8TAS1 419 aaKnown RBP15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 MAIP1Q8WWC4 291 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 AKT1S1Q96B36 256 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 AK8Q96MA6 479 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 UBE2OQ9C0C9 1292 aaKnown RBP15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 TXLNGQ9NUQ3 528 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 PCDHA4Q9UN74 947 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 MTMR7Q9Y216 660 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 M0R2N6 131 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 LAD1O00515 517 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 RASGRF2O14827 1237 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 HGSO14964 777 aaPredicted RBP15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 MFSD5Q6N075 450 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 NT5DC3Q86UY8 548 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 NCAPG2Q86XI2 1143 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 AGGF1Q8N302 714 aaeCLIP15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 HES6Q96HZ4 224 aa15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 DDX23Q9BUQ8 820 aaKnown RBP15.81■□□□□ 0.12
VPS9D1-201ENST00000389386 CCDC194A0A1B0GVG4 234 aa15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 KIAA0391O15091 583 aaKnown RBP15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 AFPP02771 609 aaKnown RBP15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 DRG2P55039 364 aaKnown RBP15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 CGB2Q6NT52 195 aa15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 ZNF571Q7Z3V5 609 aaPredicted RBP15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 ECHDC2Q86YB7 292 aa15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 RBBP8NLQ8NC74 664 aaPredicted RBP15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 CKAP2Q8WWK9 683 aa15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 GLG1Q92896 1179 aa15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 SNX24Q9Y343 169 aa15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 A0A1B0GUL6 1792 aa15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 GSTA2P09210 222 aa15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 IRF2BP2Q7Z5L9 587 aa15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 RBM12BQ8IXT5 1001 aaKnown RBP15.8■□□□□ 0.12
VPS9D1-201ENST00000389386 SUPT20HQ8NEM7 779 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms