RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 MAP2K1Q02750 393 aaPredicted RBP11.1□□□□□ -0.63
LTN1-203ENST00000389195 BMT2Q1RMZ1 405 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 KLHDC7AQ5VTJ3 777 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 SFMBT2Q5VUG0 894 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 IQCEQ6IPM2 695 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 PALB2Q86YC2 1186 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 RIOX2Q8IUF8 465 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 TMEM161BQ8NDZ6 487 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 GPRASP2Q96D09 838 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 NUP58Q9BVL2 599 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 POLR3FQ9H1D9 316 aaPredicted RBP11.1□□□□□ -0.63
LTN1-203ENST00000389195 L2HGDHQ9H9P8 463 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 SIX2Q9NPC8 291 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 KMT5AQ9NQR1 393 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 CYP26B1Q9NR63 512 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 HSPBP1Q9NZL4 362 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 AGTPBP1Q9UPW5 1226 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 EMSYQ7Z589 1322 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 WDR90Q96KV7 1748 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 MYH9P35579 1960 aaKnown RBP11.1□□□□□ -0.63
LTN1-203ENST00000389195 DOCK3Q8IZD9 2030 aa11.1□□□□□ -0.63
LTN1-203ENST00000389195 LRRIQ4A6NIV6 560 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 ATP2A1O14983 1001 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 EIF3JO75822 258 aaKnown RBP11.09□□□□□ -0.63
LTN1-203ENST00000389195 CELF2O95319 508 aaKnown RBP11.09□□□□□ -0.63
LTN1-203ENST00000389195 PHLDB3Q6NSJ2 640 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 FBXO38Q6PIJ6 1188 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 NIPA1Q7RTP0 329 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 TAS1R3Q7RTX0 852 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 ZNF571Q7Z3V5 609 aaPredicted RBP11.09□□□□□ -0.63
LTN1-203ENST00000389195 FRMD5Q7Z6J6 570 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 MNS1Q8NEH6 495 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 GLG1Q92896 1179 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 PTPN18Q99952 460 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 ZNF302Q9NR11 478 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 ODF2LQ9ULJ1 636 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 FRMD4BQ9Y2L6 1034 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 HYOU1Q9Y4L1 999 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 WDR81Q562E7 1941 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 PHLPP2Q6ZVD8 1323 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 BTBD19C9JJ37 291 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 PDHXO00330 501 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 ZMYND10O75800 440 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 FARP2O94887 1054 aaPredicted RBP11.09□□□□□ -0.63
LTN1-203ENST00000389195 CLSTN1O94985 981 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 KIF20AO95235 890 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 PSAPP07602 524 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 SRGAP2CP0DJJ0 459 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 RPL13P26373 211 aaKnown RBP11.09□□□□□ -0.63
LTN1-203ENST00000389195 HOXA7P31268 230 aaPredicted RBP11.09□□□□□ -0.63
LTN1-203ENST00000389195 JAK3P52333 1124 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 POLGP54098 1239 aaPredicted RBP11.09□□□□□ -0.63
LTN1-203ENST00000389195 TERF1P54274 439 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 KLHL30Q0D2K2 578 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 GNPTABQ3T906 1256 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 PRAMEF19Q5SWL8 479 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 C1orf220Q5T0J3 134 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 PROCA1Q8NCQ7 364 aaPredicted RBP11.09□□□□□ -0.63
LTN1-203ENST00000389195 ASAP3Q8TDY4 903 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 LENG1Q96BZ8 264 aaPredicted RBP11.09□□□□□ -0.63
LTN1-203ENST00000389195 BICD1Q96G01 975 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 STRA6Q9BX79 667 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 MRFAP1Q9Y605 127 aa11.09□□□□□ -0.63
LTN1-203ENST00000389195 HNRNPDLO14979 420 aaKnown RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 SEC31AO94979 1220 aaKnown RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 RHOXF2BP0C7M4 288 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 SUPT20HL2P0C7V6 817 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 MAGEA1P43355 309 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 FMO5P49326 533 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 SPA17Q15506 151 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 EPC2Q52LR7 807 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 ZNF746Q6NUN9 644 aaPredicted RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 MMP19Q99542 508 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 RHOXF2Q9BQY4 288 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 FAM213AQ9BRX8 229 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 HAPLN2Q9GZV7 340 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 SEPT11Q9NVA2 429 aaKnown RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 ANKFY1Q9P2R3 1169 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 TBX20Q9UMR3 447 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 CCL15-CCL14A0A0B4J2E2 113 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 CCP110O43303 1012 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 ZSCAN20P17040 1043 aaPredicted RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 OSTNP61366 133 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 ERVK-9P63128 1117 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 DMP1Q13316 513 aaPredicted RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 CCL15Q16663 113 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 ARMC9Q7Z3E5 817 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 IRF2BP2Q7Z5L9 587 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 ARHGEF19Q8IW93 802 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 ZC3H3Q8IXZ2 948 aaKnown RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 NOA1Q8NC60 698 aaKnown RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 CHST13Q8NET6 341 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 BRI3BPQ8WY22 251 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 POMGNT1Q8WZA1 660 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 CEP72Q9P209 647 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 DBR1Q9UK59 544 aaKnown RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 CTAGE9A4FU28 777 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 GNA14O95837 355 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms