RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 POTEIP0CG38 1075 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 SPATA31C1P0DKV0 1188 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 CTNNA1P35221 906 aaKnown RBP9.71□□□□□ -0.85
GPNMB-202ENST00000381990 HSD17B3P37058 310 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 BACE1P56817 501 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 COASYQ13057 564 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 CEP55Q53EZ4 464 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 SPDYCQ5MJ68 293 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 CYB5D1Q6P9G0 228 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 POTEGQ6S5H5 508 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 POTEEQ6S8J3 1075 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 CCDC65Q8IXS2 484 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 CLEC4DQ8WXI8 215 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 SLC5A5Q92911 643 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 WRNIP1Q96S55 665 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 POLR3CQ9BUI4 534 aaPredicted RBP9.71□□□□□ -0.85
GPNMB-202ENST00000381990 CNOT10Q9H9A5 744 aaKnown RBP9.71□□□□□ -0.85
GPNMB-202ENST00000381990 CD248Q9HCU0 757 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 PPANQ9NQ55 473 aaKnown RBP9.71□□□□□ -0.85
GPNMB-202ENST00000381990 PANK4Q9NVE7 773 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 GGA3Q9NZ52 723 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 DDX20Q9UHI6 824 aaKnown RBP9.71□□□□□ -0.85
GPNMB-202ENST00000381990 SUFUQ9UMX1 484 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 DNM3Q9UQ16 869 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 NFS1Q9Y697 457 aa9.71□□□□□ -0.85
GPNMB-202ENST00000381990 PITPNM2Q9BZ72 1349 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 CCDC188H7C350 402 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 PSMD10O75832 226 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 GHRP10912 638 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 EZRP15311 586 aaKnown RBP9.71□□□□□ -0.86
GPNMB-202ENST00000381990 CYP11B2P19099 503 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 HPDP32754 393 aaPredicted RBP9.71□□□□□ -0.86
GPNMB-202ENST00000381990 SLC12A3P55017 1021 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 PPP2R2AP63151 447 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 FKBP3Q00688 224 aaKnown RBP9.71□□□□□ -0.86
GPNMB-202ENST00000381990 XRCC4Q13426 336 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 HLTFQ14527 1009 aaKnown RBP eCLIP9.71□□□□□ -0.86
GPNMB-202ENST00000381990 ANKRD20A8PQ5CZ79 823 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 GKAP1Q5VSY0 366 aaPredicted RBP9.71□□□□□ -0.86
GPNMB-202ENST00000381990 LRCH2Q5VUJ6 765 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 CACNA2D3Q8IZS8 1091 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 FUKQ8N0W3 1084 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 SAMD3Q8N6K7 520 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 ZNF280CQ8ND82 737 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 RPAP3Q9H6T3 665 aaPredicted RBP9.71□□□□□ -0.86
GPNMB-202ENST00000381990 MAP3K20Q9NYL2 800 aaKnown RBP9.71□□□□□ -0.86
GPNMB-202ENST00000381990 ODF2LQ9ULJ1 636 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 SBF1O95248 1867 aa9.71□□□□□ -0.86
GPNMB-202ENST00000381990 BHMG1C9JSJ3 638 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-202ENST00000381990 MEIS1O00470 390 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 NFIBO00712 420 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 CLGNO14967 610 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 NKRFO15226 690 aaKnown RBP eCLIP9.7□□□□□ -0.86
GPNMB-202ENST00000381990 ZBED4O75132 1171 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 PTPRAP18433 802 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 ECHS1P30084 290 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 UBXN2AP68543 259 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 PPP2R5CQ13362 524 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 DGKZQ13574 1117 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 RPS6KA1Q15418 735 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 FAM26FQ5R3K3 315 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 PRAMEF18Q5VWM3 479 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 CPXCR1Q8N123 301 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 EIF2AK1Q9BQI3 630 aaKnown RBP9.7□□□□□ -0.86
GPNMB-202ENST00000381990 KDM4CQ9H3R0 1056 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 RAVER2Q9HCJ3 691 aaKnown RBP9.7□□□□□ -0.86
GPNMB-202ENST00000381990 AIPL1Q9NZN9 384 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 CTDP1Q9Y5B0 961 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-202ENST00000381990 COL4A3BPQ9Y5P4 624 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 RPTORQ8N122 1335 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 FTCDO95954 541 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 ALAS1P13196 640 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 KLRC1P26715 233 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 EPS15P42566 896 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 HIRAP54198 1017 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-202ENST00000381990 ZNF844Q08AG5 666 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 KIAA0753Q2KHM9 967 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 OTOP1Q7RTM1 612 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 MYOCDQ8IZQ8 938 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 SYT2Q8N9I0 419 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-202ENST00000381990 SCFD2Q8WU76 684 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 CEP63Q96MT8 703 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 OSBPL7Q9BZF2 842 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 WDR11Q9BZH6 1224 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 TUFT1Q9NNX1 390 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 BZW2Q9Y6E2 419 aaKnown RBP9.7□□□□□ -0.86
GPNMB-202ENST00000381990 PARP14Q460N5 1801 aa9.7□□□□□ -0.86
GPNMB-202ENST00000381990 FRMD3A2A2Y4 597 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 EML1O00423 815 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 GAS7O60861 476 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 KRT18P05783 430 aaKnown RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 ANXA13P27216 316 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 EIF3BP55884 814 aaKnown RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 MARSP56192 900 aaKnown RBP9.69□□□□□ -0.86
GPNMB-202ENST00000381990 ERVK-9P63128 1117 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 KCNMA1Q12791 1236 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 SUPT20HL1Q3ZLR7 823 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 ODF2Q5BJF6 829 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 TATDN2Q93075 761 aa9.69□□□□□ -0.86
GPNMB-202ENST00000381990 CENPTQ96BT3 561 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms