RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 FGFBP2Q9BYJ0 223 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 DAAM1Q9Y4D1 1078 aa14.98□□□□□ -0.01
SDC1-202ENST00000381150 DNAJC8O75937 253 aaPredicted RBP14.97□□□□□ -0.01
SDC1-202ENST00000381150 KRT16P08779 473 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 CRKP46108 304 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 PMS2P54278 862 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 DR1Q01658 176 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 PPP1R18Q6NYC8 613 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 ZNF571Q7Z3V5 609 aaPredicted RBP14.97□□□□□ -0.01
SDC1-202ENST00000381150 KCNK18Q7Z418 384 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 EGFL6Q8IUX8 553 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 MRRFQ96E11 262 aaKnown RBP14.97□□□□□ -0.01
SDC1-202ENST00000381150 ARHGEF10LQ9HCE6 1279 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 ARFGEF1Q9Y6D6 1849 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 RTN2O75298 545 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 GFPT2O94808 682 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 SLC16A2P36021 539 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 USP11P51784 963 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 IFI16Q16666 785 aaKnown RBP14.97□□□□□ -0.01
SDC1-202ENST00000381150 SHROOM1Q2M3G4 852 aaPredicted RBP14.97□□□□□ -0.01
SDC1-202ENST00000381150 ASTE1Q2TB18 679 aaPredicted RBP14.97□□□□□ -0.01
SDC1-202ENST00000381150 FAM26FQ5R3K3 315 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 PODNQ7Z5L7 613 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 SIAH1Q8IUQ4 282 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 HAS1Q92839 578 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 SEMA4AQ9H3S1 761 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 CNOT10Q9H9A5 744 aaKnown RBP14.97□□□□□ -0.01
SDC1-202ENST00000381150 USP17L10C9JJH3 530 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 MMP10P09238 476 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 H2AFZP0C0S5 128 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 NQO1P15559 274 aaKnown RBP14.97□□□□□ -0.01
SDC1-202ENST00000381150 VPS41P49754 854 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 KCNH2Q12809 1159 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 AGBL2Q5U5Z8 902 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 FAM43BQ6ZT52 329 aaPredicted RBP14.97□□□□□ -0.01
SDC1-202ENST00000381150 UNC13DQ70J99 1090 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 H2AFVQ71UI9 128 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 MKL1Q969V6 931 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 OSBPL1AQ9BXW6 950 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 GGA2Q9UJY4 613 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 ATF5Q9Y2D1 282 aaPredicted RBP14.97□□□□□ -0.01
SDC1-202ENST00000381150 PCDHGC5Q9Y5F6 944 aa14.97□□□□□ -0.01
SDC1-202ENST00000381150 NOL4O94818 638 aa14.96□□□□□ -0.01
SDC1-202ENST00000381150 ERFP50548 548 aa14.96□□□□□ -0.01
SDC1-202ENST00000381150 UBE2SQ16763 222 aa14.96□□□□□ -0.01
SDC1-202ENST00000381150 LONRF1Q17RB8 773 aa14.96□□□□□ -0.01
SDC1-202ENST00000381150 GPATCH4Q5T3I0 446 aaKnown RBP14.96□□□□□ -0.01
SDC1-202ENST00000381150 SEPT14Q6ZU15 432 aa14.96□□□□□ -0.01
SDC1-202ENST00000381150 SH3BP5LQ7L8J4 393 aa14.96□□□□□ -0.01
SDC1-202ENST00000381150 VPS36Q86VN1 386 aa14.96□□□□□ -0.01
SDC1-202ENST00000381150 PBKQ96KB5 322 aa14.96□□□□□ -0.01
SDC1-202ENST00000381150 DBNDD1Q9H9R9 158 aa14.96□□□□□ -0.01
SDC1-202ENST00000381150 AMFRQ9UKV5 643 aa14.96□□□□□ -0.01
SDC1-202ENST00000381150 DDTLA6NHG4 134 aaPredicted RBP14.96□□□□□ -0.02
SDC1-202ENST00000381150 CCDC169A6NNP5 214 aa14.96□□□□□ -0.02
SDC1-202ENST00000381150 ZBTB5O15062 677 aa14.96□□□□□ -0.02
SDC1-202ENST00000381150 MXRA7P84157 204 aa14.96□□□□□ -0.02
SDC1-202ENST00000381150 TNIP1Q15025 636 aa14.96□□□□□ -0.02
SDC1-202ENST00000381150 KCTD1Q719H9 257 aa14.96□□□□□ -0.02
SDC1-202ENST00000381150 ADAM33Q9BZ11 813 aa14.96□□□□□ -0.02
SDC1-202ENST00000381150 ETNK1Q9HBU6 452 aa14.96□□□□□ -0.02
SDC1-202ENST00000381150 FAM198AQ9UFP1 575 aa14.96□□□□□ -0.02
SDC1-202ENST00000381150 PCDHB13Q9Y5F0 798 aa14.96□□□□□ -0.02
SDC1-202ENST00000381150 LCA5LO95447 670 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 ECM1Q16610 540 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 GUF1Q8N442 669 aaKnown RBP14.95□□□□□ -0.02
SDC1-202ENST00000381150 STK17AQ9UEE5 414 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 SLX4Q8IY92 1834 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 HIP1RO75146 1068 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 FLOT1O75955 427 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 CREB1P16220 341 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 ATP2A2P16615 1042 aaKnown RBP14.95□□□□□ -0.02
SDC1-202ENST00000381150 NR2F2P24468 414 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 TMEM119Q4V9L6 283 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 LACTB2Q53H82 288 aaPredicted RBP14.95□□□□□ -0.02
SDC1-202ENST00000381150 DACT2Q5SW24 774 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 ZNF449Q6P9G9 518 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 LRRC55Q6ZSA7 311 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 LONP2Q86WA8 852 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 VSIG1Q86XK7 387 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 IQCDQ96DY2 449 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 CCDC17Q96LX7 622 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 DDX23Q9BUQ8 820 aaKnown RBP14.95□□□□□ -0.02
SDC1-202ENST00000381150 E9PMD0 336 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 HMGB2P26583 209 aaKnown RBP14.95□□□□□ -0.02
SDC1-202ENST00000381150 CACNB3P54284 484 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 SLC8A3P57103 927 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 LRRC63Q05C16 580 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 ANKRD20A2Q5SQ80 823 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 ANKRD20A1Q5TYW2 823 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 ANKRD20A3Q5VUR7 823 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 IDI2Q9BXS1 227 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 FAM114A2Q9NRY5 505 aa14.95□□□□□ -0.02
SDC1-202ENST00000381150 PVALEFA0A1B0GWK0 134 aa14.94□□□□□ -0.02
SDC1-202ENST00000381150 RASGRF2O14827 1237 aa14.94□□□□□ -0.02
SDC1-202ENST00000381150 CLIC2O15247 247 aa14.94□□□□□ -0.02
SDC1-202ENST00000381150 HLA-DOAP06340 250 aa14.94□□□□□ -0.02
SDC1-202ENST00000381150 PPP1R2P41236 205 aa14.94□□□□□ -0.02
SDC1-202ENST00000381150 FKBP1AP62942 108 aaKnown RBP14.94□□□□□ -0.02
SDC1-202ENST00000381150 RBBP5Q15291 538 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms