RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 POTEGQ6S5H5 508 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 POTEEQ6S8J3 1075 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 MORC4Q8TE76 937 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.14■□□□□ 0.336e-7■■■□□ 14.7
COL2A1-202ENST00000380518 FAM96AQ9H5X1 160 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 KIF9Q9HAQ2 790 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 PNPLA7Q6ZV29 1317 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 TRPA1O75762 1119 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 TAC1P20366 129 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 PHKA2P46019 1235 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 NEDD1Q8NHV4 660 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 SPATS2LQ9NUQ6 558 aaKnown RBP17.14■□□□□ 0.33
COL2A1-202ENST00000380518 PPARGC1AQ9UBK2 798 aaKnown RBP17.14■□□□□ 0.33
COL2A1-202ENST00000380518 COL15A1P39059 1388 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 PAMP19021 973 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 TRIM28Q13263 835 aaKnown RBP17.14■□□□□ 0.33
COL2A1-202ENST00000380518 EP400NLQ6ZTU2 488 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 PSPC1Q8WXF1 523 aaKnown RBP17.14■□□□□ 0.33
COL2A1-202ENST00000380518 MRPL46Q9H2W6 279 aaKnown RBP17.14■□□□□ 0.33
COL2A1-202ENST00000380518 KLHL8Q9P2G9 620 aaPredicted RBP17.14■□□□□ 0.33
COL2A1-202ENST00000380518 F5H6K3 240 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 F8W8V4 182 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 ATP5HO75947 161 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 APOEP02649 317 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 INPP1P49441 399 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 KLRC3Q07444 240 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 PASD1Q8IV76 773 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 DHX40Q8IX18 779 aaKnown RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 SEPT12Q8IYM1 358 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 RAVER2Q9HCJ3 691 aaKnown RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 SHROOM2Q13796 1616 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 RXRBP28702 533 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 CIITAP33076 1130 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 SOX5P35711 763 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 PMS2P54278 862 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 NFX1Q12986 1120 aaKnown RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 KCNB1Q14721 858 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 ZNF568Q3ZCX4 644 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 BRINP3Q76B58 766 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 INTS2Q9H0H0 1204 aaKnown RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 CYP26B1Q9NR63 512 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 UBE4BO95155 1302 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 PP2D1A8MPX8 630 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 CTIFO43310 598 aaKnown RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 CYP19A1P11511 503 aaPredicted RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 USP11P51784 963 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 MAGOHP61326 146 aaKnown RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 RWDD4Q6NW29 188 aaKnown RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 PARD3BQ8TEW8 1205 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 DDX47Q9H0S4 455 aaKnown RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 FAM187AA6NFU0 413 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 C21orf2O43822 256 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 PAPOLAP51003 745 aaKnown RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 PDCD2Q16342 344 aaPredicted RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 SLC27A3Q5K4L6 730 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 FAM47EQ6ZV65 393 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 SLC10A4Q96EP9 437 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 NUP85Q9BW27 656 aa17.13■□□□□ 0.33
COL2A1-202ENST00000380518 XAB2Q9HCS7 855 aaKnown RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 NOP53Q9NZM5 478 aaKnown RBP17.13■□□□□ 0.33
COL2A1-202ENST00000380518 FTLP02792 175 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-202ENST00000380518 ADRA2BP18089 450 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 ENOSF1Q7L5Y1 443 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 EPM2AIP1Q7L775 607 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-202ENST00000380518 RPAINQ86UA6 219 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 CXorf38Q8TB03 319 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 TMEM60Q9H2L4 133 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 SLITRK6Q9H5Y7 841 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 RNF146Q9NTX7 359 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 AXIN2Q9Y2T1 843 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 PFASO15067 1338 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 LMNAP02545 664 aaKnown RBP17.12■□□□□ 0.33
COL2A1-202ENST00000380518 MDM2Q00987 491 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-202ENST00000380518 SNRNP48Q6IEG0 339 aaKnown RBP17.12■□□□□ 0.33
COL2A1-202ENST00000380518 RNF25Q96BH1 459 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-202ENST00000380518 TAF1DQ9H5J8 278 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-202ENST00000380518 GRAMD1BQ3KR37 738 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 SPDYE1Q8NFV5 336 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-202ENST00000380518 APOBEC2Q9Y235 224 aaKnown RBP17.12■□□□□ 0.33
COL2A1-202ENST00000380518 CDC42BPGQ6DT37 1551 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 FAM196BA6NMK8 535 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 KIF28PB7ZC32 967 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 GYG2O15488 501 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 TADA3O75528 432 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 TDP2O95551 362 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 KRT7P08729 469 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 SDC4P31431 198 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 MAGEA9P43362 315 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 ZNF211Q13398 564 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-202ENST00000380518 NBPF9Q3BBW0 867 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 TADA2BQ86TJ2 420 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 SUN2Q9UH99 717 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 HEY1Q9Y5J3 304 aa17.12■□□□□ 0.33
COL2A1-202ENST00000380518 HDLBPQ00341 1268 aaKnown RBP17.11■□□□□ 0.33
COL2A1-202ENST00000380518 ADGRF4Q8IZF3 695 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 SCG3Q8WXD2 468 aaKnown RBP17.11■□□□□ 0.33
COL2A1-202ENST00000380518 C2orf40Q9H1Z8 148 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 INTUQ9ULD6 942 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 KPNA7A9QM74 516 aa17.11■□□□□ 0.33
COL2A1-202ENST00000380518 NCK2O43639 380 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms