RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 TMEM260Q9NX78 707 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 CNOT8Q9UFF9 292 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 CRB1P82279 1406 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 NPHP3-ACAD11A0A0J9YXS1 232 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 POTEB3A0JP26 581 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 POTECB2RU33 542 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 K7ERI5 159 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 COPEO14579 308 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 GNGT2O14610 69 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 TFRCP02786 760 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 NOP14P78316 857 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 DRAP1Q14919 205 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 POTEBQ6S5H4 581 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 RSRC2Q7L4I2 434 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 TRAPPC11Q7Z392 1133 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 GLYCTKQ8IVS8 523 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 ZBTB10Q96DT7 871 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 SNF8Q96H20 258 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 CEP170P1Q96L14 293 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 SENP2Q9HC62 589 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 AXIN2Q9Y2T1 843 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 CAPN6Q9Y6Q1 641 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 NEURL4Q96JN8 1562 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 FMN2Q9NZ56 1722 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 LOC102724428A0A0B4J2F2 783 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 H3BQF6 201 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 P4HA1P13674 534 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 HMGB2P26583 209 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 SIK1P57059 783 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 KRT17Q04695 432 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 IFRD2Q12894 506 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 STK4Q13043 487 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 SDCCAG3Q96C92 435 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 SUDS3Q9H7L9 328 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 UBN1Q9NPG3 1134 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 NXF1Q9UBU9 619 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 CCPG1Q9ULG6 757 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 APOBEC2Q9Y235 224 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 KCNB1Q14721 858 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 TRIM65Q6PJ69 517 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 TRMT10CQ7L0Y3 403 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 ADGRF4Q8IZF3 695 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 RAD54LQ92698 747 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 ALG13Q9NP73 1137 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 PPARGC1AQ9UBK2 798 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 UTYO14607 1347 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 PPP1R3GB7ZBB8 358 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 GAP43P17677 238 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 GUF1Q8N442 669 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 USP38Q8NB14 1042 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 MYCBPAPQ8TBZ2 947 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 ZNF564Q8TBZ8 553 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 SH3RF3Q8TEJ3 882 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 NRBF2Q96F24 287 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 CSRNP1Q96S65 589 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 MAP3K14Q99558 947 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 SCINQ9Y6U3 715 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 KIDINS220Q9ULH0 1771 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 TNNC2P02585 160 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 UCHL3P15374 230 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 ZNF18P17022 549 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 COPB2P35606 906 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 BPIFB4P59827 614 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 DNAJC3Q13217 504 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 ABCB5Q2M3G0 1257 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 C16orf87Q6PH81 154 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 AEBP2Q6ZN18 517 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 TEX2Q8IWB9 1127 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 TRIM59Q8IWR1 403 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 TRIM42Q8IWZ5 723 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 CCDC138Q96M89 665 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 PHF20Q9BVI0 1012 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 ANKARQ7Z5J8 1434 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 TCP10L2B9ZVM9 353 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 TDP2O95551 362 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 GARSP41250 739 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 CRKLP46109 303 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 PHEXP78562 749 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 TFAMQ00059 246 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 SUSD4Q5VX71 490 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 NAIF1Q69YI7 327 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 RBM43Q6ZSC3 357 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 MAP7D3Q8IWC1 876 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 VTI1AQ96AJ9 217 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 TRIM56Q9BRZ2 755 aaKnown RBP4.48□□□□□ -1.69
BRCA2-201ENST00000380152 MINPP1Q9UNW1 487 aa4.48□□□□□ -1.69
BRCA2-201ENST00000380152 LTN1O94822 1766 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 USP32Q8NFA0 1604 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 VWDEQ8N2E2 1590 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 A0A0U1RQJ8 604 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 MIF4GDA9UHW6 222 aaKnown RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ALAS1P13196 640 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 HIC1Q14526 733 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 RAPGEF5Q92565 580 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 RNF25Q96BH1 459 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ARL8AQ96BM9 186 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 NUP85Q9BW27 656 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 WNT8AQ9H1J5 351 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 ZWILCHQ9H900 591 aa4.47□□□□□ -1.69
BRCA2-201ENST00000380152 L3MBTL1Q9Y468 752 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms