RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 RECQLP46063 649 aaPredicted RBP11.94□□□□□ -0.5
RAD50-201ENST00000378823 PDCD6IPQ8WUM4 868 aaKnown RBP11.94□□□□□ -0.5
RAD50-201ENST00000378823 TLR7Q9NYK1 1049 aaKnown RBP11.94□□□□□ -0.5
RAD50-201ENST00000378823 CLRN2A0PK11 232 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 KCNQ3O43525 872 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 TBXAS1P24557 533 aaPredicted RBP11.93□□□□□ -0.5
RAD50-201ENST00000378823 PTK2BQ14289 1009 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 MXD4Q14582 209 aaPredicted RBP11.93□□□□□ -0.5
RAD50-201ENST00000378823 ZNF579Q8NAF0 562 aaKnown RBP11.93□□□□□ -0.5
RAD50-201ENST00000378823 NUP85Q9BW27 656 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 ARPP19P56211 112 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 ELMSAN1Q6PJG2 1045 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 OTUB1Q96FW1 271 aaPredicted RBP11.93□□□□□ -0.5
RAD50-201ENST00000378823 MTRQ99707 1265 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 CNOT8Q9UFF9 292 aaKnown RBP11.93□□□□□ -0.5
RAD50-201ENST00000378823 LGALS16A8MUM7 142 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 IL6STP40189 918 aaPredicted RBP11.93□□□□□ -0.5
RAD50-201ENST00000378823 JAK3P52333 1124 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 PMS2P54278 862 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 OR6B3Q8NGW1 331 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 KRT8P05787 483 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 CCDC159P0C7I6 412 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 ATP1A3P13637 1013 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 CRKLP46109 303 aaKnown RBP11.93□□□□□ -0.5
RAD50-201ENST00000378823 DSTYKQ6XUX3 929 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 ARHGAP27Q6ZUM4 889 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 GANCQ8TET4 914 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 KIF20BQ96Q89 1820 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 GRID2IPA4D2P6 1211 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 H0Y626 953 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 TRIM16O95361 564 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 POU5F1BQ06416 359 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 LRRC31Q6UY01 552 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 GRAMD1AQ96CP6 724 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 WNT8AQ9H1J5 351 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 BHMT2Q9H2M3 363 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 ECT2Q9H8V3 914 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 BNIP3LO60238 219 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 CCDC22O60826 627 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 CD2BP2O95400 341 aaKnown RBP11.93□□□□□ -0.5
RAD50-201ENST00000378823 HOXA13P31271 388 aaPredicted RBP11.93□□□□□ -0.5
RAD50-201ENST00000378823 DYNLL1P63167 89 aaKnown RBP11.93□□□□□ -0.5
RAD50-201ENST00000378823 SARM1Q6SZW1 724 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 PIGOQ8TEQ8 1089 aa11.93□□□□□ -0.5
RAD50-201ENST00000378823 TTC7AQ9ULT0 858 aaPredicted RBP11.93□□□□□ -0.5
RAD50-201ENST00000378823 CCDC195A0A1B0GUA6 201 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 GFPT1Q06210 699 aaPredicted RBP11.92□□□□□ -0.5
RAD50-201ENST00000378823 RESTQ13127 1097 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 SLITRK6Q9H5Y7 841 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 ZSCAN9O15535 394 aaPredicted RBP11.92□□□□□ -0.5
RAD50-201ENST00000378823 GPR162Q16538 588 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 SLFNL1Q499Z3 407 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 VPS11Q9H270 941 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 SLAIN2Q9P270 581 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 ATP7BP35670 1465 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 SAMD9Q5K651 1589 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 GNL1P36915 607 aaPredicted RBP11.92□□□□□ -0.5
RAD50-201ENST00000378823 TMEM35BQ8NCS4 154 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.92□□□□□ -0.57e-7■■□□□ 12.1
RAD50-201ENST00000378823 UBN2Q6ZU65 1347 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 ITSN1Q15811 1721 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 ASAP2O43150 1006 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 BBOX1O75936 387 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 HNRNPCP07910 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
RAD50-201ENST00000378823 AP1B1Q10567 949 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 RC3H1Q5TC82 1133 aaKnown RBP11.92□□□□□ -0.5
RAD50-201ENST00000378823 TTC30BQ8N4P2 665 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 MCPH1Q8NEM0 835 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 SLC26A7Q8TE54 656 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 RUBCNQ92622 972 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 PRKAG2Q9UGJ0 569 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 GDF11O95390 407 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 UBE2SQ16763 222 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 TJAP1Q5JTD0 557 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 HEATR6Q6AI08 1181 aaKnown RBP11.92□□□□□ -0.5
RAD50-201ENST00000378823 TMEM270Q6UE05 265 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 SNF8Q96H20 258 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 PUS7LQ9H0K6 701 aaKnown RBP11.92□□□□□ -0.5
RAD50-201ENST00000378823 USP17L3A6NCW0 530 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 USP17L4A6NCW7 530 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 KCNH2Q12809 1159 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 USP17L1Q7RTZ2 530 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 FAM160B2Q86V87 743 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 FAM161BQ96MY7 647 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 MLXIPLQ9NP71 852 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 UBE4BO95155 1302 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 GOLGA8IPA6NC78 632 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 GOLGA8JA6NMD2 632 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 GGPS1O95749 300 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 IL10P22301 178 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 GYS2P54840 703 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 MRPS25P82663 173 aaKnown RBP11.92□□□□□ -0.5
RAD50-201ENST00000378823 MTMR1Q13613 665 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 TFDP2Q14188 446 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 PARP9Q8IXQ6 854 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 GFM2Q969S9 779 aaKnown RBP11.92□□□□□ -0.5
RAD50-201ENST00000378823 SNX24Q9Y343 169 aa11.92□□□□□ -0.5
RAD50-201ENST00000378823 SERPINI2O75830 405 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 CATSPER3Q86XQ3 398 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms