RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 PADI3Q9ULW8 664 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 SCN5AQ14524 2016 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 ABHD14A-ACY1A0A1B0GW23 586 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 GPR182O15218 404 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 STAT6P42226 847 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 PTENP60484 403 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 MAPK7Q13164 816 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 CAPSQ13938 189 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 IKBKEQ14164 716 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 TFDP1Q14186 410 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 ODR4Q5SWX8 454 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 SRGAP1Q7Z6B7 1085 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 FAM228AQ86W67 206 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 PDILTQ8N807 584 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 IQUBQ8NA54 791 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 RNF149Q8NC42 400 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 NFKBIZQ9BYH8 718 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 INO80BQ9C086 356 aaPredicted RBP20.77■□□□□ 0.92
SSU72-203ENST00000378725 CUEDC2Q9H467 287 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 POLD4Q9HCU8 107 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 KCNH3Q9ULD8 1083 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 ST3GAL5Q9UNP4 418 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 HPSEQ9Y251 543 aa20.77■□□□□ 0.92
SSU72-203ENST00000378725 EFCAB14O75071 495 aa20.76■□□□□ 0.91
SSU72-203ENST00000378725 HIP1RO75146 1068 aa20.76■□□□□ 0.91
SSU72-203ENST00000378725 PAK2Q13177 524 aa20.76■□□□□ 0.91
SSU72-203ENST00000378725 DHX8Q14562 1220 aaKnown RBP20.76■□□□□ 0.91
SSU72-203ENST00000378725 SV2BQ7L1I2 683 aa20.76■□□□□ 0.91
SSU72-203ENST00000378725 GPBP1Q86WP2 473 aa20.76■□□□□ 0.91
SSU72-203ENST00000378725 BSNDQ8WZ55 320 aa20.76■□□□□ 0.91
SSU72-203ENST00000378725 DRC1Q96MC2 740 aa20.76■□□□□ 0.91
SSU72-203ENST00000378725 SCLT1Q96NL6 688 aa20.76■□□□□ 0.91
SSU72-203ENST00000378725 PYM1Q9BRP8 204 aaKnown RBP20.76■□□□□ 0.91
SSU72-203ENST00000378725 C17orf75Q9HAS0 396 aa20.76■□□□□ 0.91
SSU72-203ENST00000378725 SIP14410 1827 aa20.76■□□□□ 0.91
SSU72-203ENST00000378725 POLR2DO15514 142 aaKnown RBP20.75■□□□□ 0.91
SSU72-203ENST00000378725 GIT2Q14161 759 aa20.75■□□□□ 0.91
SSU72-203ENST00000378725 RNPC3Q96LT9 517 aaKnown RBP20.75■□□□□ 0.91
SSU72-203ENST00000378725 FTHL17Q9BXU8 183 aa20.75■□□□□ 0.91
SSU72-203ENST00000378725 MTIF3Q9H2K0 278 aaKnown RBP20.75■□□□□ 0.91
SSU72-203ENST00000378725 TMX1Q9H3N1 280 aa20.75■□□□□ 0.91
SSU72-203ENST00000378725 CXXC1Q9P0U4 656 aaPredicted RBP20.75■□□□□ 0.91
SSU72-203ENST00000378725 ODF2LQ9ULJ1 636 aa20.75■□□□□ 0.91
SSU72-203ENST00000378725 NPHP3-ACAD11A0A0J9YXS1 232 aa20.74■□□□□ 0.91
SSU72-203ENST00000378725 A0A1B0GVL5 298 aa20.74■□□□□ 0.91
SSU72-203ENST00000378725 CSDE1O75534 798 aaKnown RBP20.74■□□□□ 0.91
SSU72-203ENST00000378725 PFKFB1P16118 471 aa20.74■□□□□ 0.91
SSU72-203ENST00000378725 NAMPTP43490 491 aa20.74■□□□□ 0.91
SSU72-203ENST00000378725 PHKA2P46019 1235 aa20.74■□□□□ 0.91
SSU72-203ENST00000378725 NFX1Q12986 1120 aaKnown RBP20.74■□□□□ 0.91
SSU72-203ENST00000378725 PPP2R5AQ15172 486 aa20.74■□□□□ 0.91
SSU72-203ENST00000378725 PCBP1Q15365 356 aaKnown RBP eCLIP20.74■□□□□ 0.91
SSU72-203ENST00000378725 CDCA2Q69YH5 1023 aaPredicted RBP20.74■□□□□ 0.91
SSU72-203ENST00000378725 RTN4RL1Q86UN2 441 aaPredicted RBP20.74■□□□□ 0.91
SSU72-203ENST00000378725 DHX58Q96C10 678 aa20.74■□□□□ 0.91
SSU72-203ENST00000378725 IFT74Q96LB3 600 aa20.74■□□□□ 0.91
SSU72-203ENST00000378725 NTPCRQ9BSD7 190 aaKnown RBP20.74■□□□□ 0.91
SSU72-203ENST00000378725 MINDY3Q9H8M7 445 aa20.74■□□□□ 0.91
SSU72-203ENST00000378725 KBTBD4Q9NVX7 518 aa20.74■□□□□ 0.91
SSU72-203ENST00000378725 LOXHD1Q8IVV2 1947 aa20.74■□□□□ 0.91
SSU72-203ENST00000378725 MYMKA6NI61 221 aa20.73■□□□□ 0.91
SSU72-203ENST00000378725 ENPP3O14638 875 aa20.73■□□□□ 0.91
SSU72-203ENST00000378725 RAD51AP2Q09MP3 1159 aa20.73■□□□□ 0.91
SSU72-203ENST00000378725 DSC3Q14574 896 aa20.73■□□□□ 0.91
SSU72-203ENST00000378725 CSPP1Q1MSJ5 1256 aa20.73■□□□□ 0.91
SSU72-203ENST00000378725 CLEC17AQ6ZS10 378 aa20.73■□□□□ 0.91
SSU72-203ENST00000378725 REEP2Q9BRK0 252 aa20.73■□□□□ 0.91
SSU72-203ENST00000378725 TNMDQ9H2S6 317 aa20.73■□□□□ 0.91
SSU72-203ENST00000378725 KCNG1Q9UIX4 513 aa20.73■□□□□ 0.91
SSU72-203ENST00000378725 TCHHQ07283 1943 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.72■□□□□ 0.91
SSU72-203ENST00000378725 SFI1A8K8P3 1242 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 PLS3P13797 630 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 FGFR4P22455 802 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 SFPQP23246 707 aaKnown RBP eCLIP20.72■□□□□ 0.911e-7■□□□□ 11.3
SSU72-203ENST00000378725 NDUFA8P51970 172 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 ZNF131P52739 623 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 WDR5P61964 334 aaKnown RBP20.72■□□□□ 0.91
SSU72-203ENST00000378725 MBTD1Q05BQ5 628 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 TMEM87AQ8NBN3 555 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 PHOSPHO2Q8TCD6 241 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 MRPS27Q92552 414 aaKnown RBP20.72■□□□□ 0.91
SSU72-203ENST00000378725 DDX12PQ92771 950 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 C2orf40Q9H1Z8 148 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 TSPYL2Q9H2G4 693 aaPredicted RBP20.72■□□□□ 0.91
SSU72-203ENST00000378725 GOLPH3LQ9H4A5 285 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 MAGEF1Q9HAY2 307 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 CHST12Q9NRB3 414 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 USP25Q9UHP3 1055 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 SLC4A7Q9Y6M7 1214 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 TET1Q8NFU7 2136 aa20.72■□□□□ 0.91
SSU72-203ENST00000378725 LRRIQ4A6NIV6 560 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 ZBBXA8MT70 800 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 SLFN14P0C7P3 912 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 NPTX2P47972 431 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 PEX3P56589 373 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 CACNB1Q02641 598 aaPredicted RBP20.71■□□□□ 0.91
SSU72-203ENST00000378725 LRIT3Q3SXY7 679 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 CNNM4Q6P4Q7 775 aa20.71■□□□□ 0.91
SSU72-203ENST00000378725 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.71■□□□□ 0.915e-7■■□□□ 13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms