RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.58□□□□□ -0.4
NPHP4-202ENST00000378161 SNX27Q96L92 541 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 FNBP1Q96RU3 617 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 ADGRB1O14514 1584 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 KCNK3O14649 394 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 CYP27B1O15528 508 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 PDE8AO60658 829 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 CCDC159P0C7I6 412 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 SLCO1A2P46721 670 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 CD97P48960 835 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 COPB1P53618 953 aaKnown RBP12.58□□□□□ -0.4
NPHP4-202ENST00000378161 SLC34A1Q06495 639 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 NR1D2Q14995 579 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 TMTC4Q5T4D3 741 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 PAPD7Q5XG87 772 aaKnown RBP12.58□□□□□ -0.4
NPHP4-202ENST00000378161 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 LRRC49Q8IUZ0 686 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 VMP1Q96GC9 406 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 RXFP1Q9HBX9 757 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 LRRC42Q9Y546 428 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 TEX33O43247 280 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 CIAO1O76071 339 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 TFAP4Q01664 338 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 STK4Q13043 487 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 TMEM63BQ5T3F8 832 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 TYW1BQ6NUM6 668 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 FMO2Q99518 471 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 TRIM55Q9BYV6 548 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 CAAP1Q9H8G2 361 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 C6orf50Q9HD87 102 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 RABGEF1Q9UJ41 708 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 TMEM221A6NGB7 291 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 BTBD18B2RXH4 712 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 MOCS3O95396 460 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 NAPAP54920 295 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 ATP1A4Q13733 1029 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 CD302Q8IX05 232 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 ICA1LQ8NDH6 482 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 ZFP69BQ9UJL9 534 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 TTC7AQ9ULT0 858 aaPredicted RBP12.57□□□□□ -0.4
NPHP4-202ENST00000378161 GOLGA8IPA6NC78 632 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 ZNF233A6NK53 670 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 A8MUI8 341 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 RGL2O15211 777 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 BUB1O43683 1085 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 GSTT2P0CG29 244 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 GSTT2BP0CG30 244 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 IZUMO2Q6UXV1 221 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 ANKRD13CQ8N6S4 541 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 SLC7A5P2Q9GIP4 190 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 ZMYND12Q9H0C1 365 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 METTL5Q9NRN9 209 aaKnown RBP12.57□□□□□ -0.4
NPHP4-202ENST00000378161 NMRK1Q9NWW6 199 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 PTTG2Q9NZH5 202 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 LRWD1Q9UFC0 647 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 ABCA9Q8IUA7 1624 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 GPR75-ASB3A0A0A6YYF3 556 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 ENDOUP21128 410 aaKnown RBP12.57□□□□□ -0.4
NPHP4-202ENST00000378161 EZH2Q15910 746 aaKnown RBP12.57□□□□□ -0.4
NPHP4-202ENST00000378161 NFRKBQ6P4R8 1299 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 DDI1Q8WTU0 396 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 ASCC2Q9H1I8 757 aaPredicted RBP12.57□□□□□ -0.4
NPHP4-202ENST00000378161 TRIM10Q9UDY6 481 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 ASB3Q9Y575 518 aa12.57□□□□□ -0.4
NPHP4-202ENST00000378161 PRAMEF22A3QJZ6 481 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 ATP6V1B1P15313 513 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 MX2P20592 715 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 GNA11P29992 359 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 NUP107P57740 925 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 CYP27A1Q02318 531 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 CTDSPL2Q05D32 466 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 LRRC14Q15048 493 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 APOA5Q6Q788 366 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 MYO1HQ8N1T3 1032 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 COX4I2Q96KJ9 171 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 PAIP1Q9H074 479 aaKnown RBP12.56□□□□□ -0.4
NPHP4-202ENST00000378161 PPP1R1BQ9UD71 204 aaPredicted RBP12.56□□□□□ -0.4
NPHP4-202ENST00000378161 PARP2Q9UGN5 583 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 TELO2Q9Y4R8 837 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 RSPH10B2B2RC85 870 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 TTI1O43156 1089 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 B3GALNT1O75752 331 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 RSPH10BP0C881 870 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 ACADVLP49748 655 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 GSTO1P78417 241 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 SLC2A7Q6PXP3 512 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 PASD1Q8IV76 773 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 ZNF654Q8IZM8 581 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 ENGASEQ8NFI3 743 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 OSCP1Q8WVF1 389 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 UCMAQ8WVF2 138 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 PUS3Q9BZE2 481 aaKnown RBP12.56□□□□□ -0.4
NPHP4-202ENST00000378161 AZI2Q9H6S1 392 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 NIP7Q9Y221 180 aaKnown RBP eCLIP12.56□□□□□ -0.4
NPHP4-202ENST00000378161 GOLGA8JA6NMD2 632 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 KCNJ18B7U540 433 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 KRT8P05787 483 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 PDE6AP16499 860 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 HSD17B3P37058 310 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms