RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 MBLAC1A4D2B0 266 aaPredicted RBP14.28□□□□□ -0.12
CBWD3-203ENST00000377344 KIF20AO95235 890 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 VTNP04004 478 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 SRGAP2CP0DJJ0 459 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 ZNF165P49910 485 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 RUFY4Q6ZNE9 571 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 STXBP4Q6ZWJ1 553 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 ZNF720Q7Z2F6 126 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 HAUS6Q7Z4H7 955 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 NELFCDQ8IXH7 590 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 ADSSL1Q8N142 457 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 DEPTORQ8TB45 409 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 NLRP4Q96MN2 994 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 SCLT1Q96NL6 688 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 CRISPLD2Q9H0B8 497 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 CTNND2Q9UQB3 1225 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 NOD1Q9Y239 953 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 PCDHB13Q9Y5F0 798 aa14.28□□□□□ -0.12
CBWD3-203ENST00000377344 EVPLQ92817 2033 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 A0A0U1RQG5 324 aaPredicted RBP14.27□□□□□ -0.12
CBWD3-203ENST00000377344 PPP1R3GB7ZBB8 358 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 PSMA7O14818 248 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 PRPF6O94906 941 aaKnown RBP14.27□□□□□ -0.12
CBWD3-203ENST00000377344 NAMPTP43490 491 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 GJA8P48165 433 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 NCKAP1LP55160 1127 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 STX17P56962 302 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 ADAM17P78536 824 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 CAPSQ13938 189 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 TFDP1Q14186 410 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 GAS2L3Q86XJ1 694 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 KIAA0319LQ8IZA0 1049 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 LINC01465Q8N7H1 131 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 RNF149Q8NC42 400 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 RNF214Q8ND24 703 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 SLC17A8Q8NDX2 589 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 SPIRE2Q8WWL2 714 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 FIZ1Q96SL8 496 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 SENP6Q9GZR1 1112 aaPredicted RBP14.27□□□□□ -0.12
CBWD3-203ENST00000377344 KCNG1Q9UIX4 513 aa14.27□□□□□ -0.12
CBWD3-203ENST00000377344 SMIM35A0A1B0GVV1 85 aa14.27□□□□□ -0.13
CBWD3-203ENST00000377344 ASAP2O43150 1006 aa14.27□□□□□ -0.13
CBWD3-203ENST00000377344 MAPTP10636 758 aaKnown RBP14.27□□□□□ -0.13
CBWD3-203ENST00000377344 HOXC8P31273 242 aa14.27□□□□□ -0.13
CBWD3-203ENST00000377344 PPP1R2P41236 205 aa14.27□□□□□ -0.13
CBWD3-203ENST00000377344 TMEM62Q0P6H9 643 aa14.27□□□□□ -0.13
CBWD3-203ENST00000377344 PAK1Q13153 545 aa14.27□□□□□ -0.13
CBWD3-203ENST00000377344 PTGISQ16647 500 aa14.27□□□□□ -0.13
CBWD3-203ENST00000377344 SESTD1Q86VW0 696 aa14.27□□□□□ -0.13
CBWD3-203ENST00000377344 GUF1Q8N442 669 aaKnown RBP14.27□□□□□ -0.13
CBWD3-203ENST00000377344 SCFD1Q8WVM8 642 aa14.27□□□□□ -0.13
CBWD3-203ENST00000377344 DNAJB3Q8WWF6 145 aa14.27□□□□□ -0.13
CBWD3-203ENST00000377344 NELFBQ8WX92 580 aa14.27□□□□□ -0.13
CBWD3-203ENST00000377344 GINS2Q9Y248 185 aa14.27□□□□□ -0.13
CBWD3-203ENST00000377344 DENND3A2RUS2 1198 aa14.26□□□□□ -0.13
CBWD3-203ENST00000377344 EIF3DO15371 548 aaKnown RBP eCLIP14.26□□□□□ -0.13
CBWD3-203ENST00000377344 CAVIN2O95810 425 aa14.26□□□□□ -0.13
CBWD3-203ENST00000377344 COBLL1Q53SF7 1204 aa14.26□□□□□ -0.13
CBWD3-203ENST00000377344 EPM2AIP1Q7L775 607 aaPredicted RBP14.26□□□□□ -0.13
CBWD3-203ENST00000377344 TMEM161BQ8NDZ6 487 aa14.26□□□□□ -0.13
CBWD3-203ENST00000377344 FAM200AQ8TCP9 573 aa14.26□□□□□ -0.13
CBWD3-203ENST00000377344 NLRP7Q8WX94 980 aa14.26□□□□□ -0.13
CBWD3-203ENST00000377344 NTPCRQ9BSD7 190 aaKnown RBP14.26□□□□□ -0.13
CBWD3-203ENST00000377344 TRMT13Q9NUP7 481 aaKnown RBP14.26□□□□□ -0.13
CBWD3-203ENST00000377344 ADGRA3Q8IWK6 1321 aa14.26□□□□□ -0.13
CBWD3-203ENST00000377344 BECN2A8MW95 431 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 H0YCG3 227 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 ARVCFO00192 962 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 ERCC5P28715 1186 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-203ENST00000377344 NLRP11P59045 1033 aaKnown RBP14.25□□□□□ -0.13
CBWD3-203ENST00000377344 PTPN11Q06124 597 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-203ENST00000377344 KCNA1Q09470 495 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 ALCAMQ13740 583 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 TAF2Q6P1X5 1199 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 ZBTB8OSQ8IWT0 167 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 SYCP3Q8IZU3 236 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 AOPEPQ8N6M6 819 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 DHTKD1Q96HY7 919 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-203ENST00000377344 CBX8Q9HC52 389 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 TRIP12Q14669 1992 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-203ENST00000377344 A0A087WZ62 844 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 TRIM49BA6NDI0 452 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 K7ERI5 159 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 ATN1P54259 1190 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-203ENST00000377344 GTF2BQ00403 316 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 STRN3Q13033 797 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 TPD52L1Q16890 204 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-203ENST00000377344 KIZQ2M2Z5 673 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 CT47A1Q5JQC4 288 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-203ENST00000377344 RSPH3Q86UC2 560 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 LUZP1Q86V48 1076 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 ZNF507Q8TCN5 953 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 DIS3LQ8TF46 1054 aaKnown RBP14.25□□□□□ -0.13
CBWD3-203ENST00000377344 P2RX5Q93086 422 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 ACCSQ96QU6 501 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 FDXACB1Q9BRP7 624 aaPredicted RBP14.25□□□□□ -0.13
CBWD3-203ENST00000377344 ST6GALNAC4Q9H4F1 302 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 ARHGAP28Q9P2N2 729 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 RWDD2AQ9UIY3 292 aa14.25□□□□□ -0.13
CBWD3-203ENST00000377344 TBX20Q9UMR3 447 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms