RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 ISCUQ9H1K1 167 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 TMEM59LQ9UK28 342 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 FAM169AQ9Y6X4 670 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 EMSYQ7Z589 1322 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 KRT13P13646 458 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 ECHS1P30084 290 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 BTNL9Q6UXG8 535 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 ACTRT1Q8TDG2 376 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 GLG1Q92896 1179 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 KAT5Q92993 513 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 STK33Q9BYT3 514 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 TSPYL1Q9H0U9 437 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 GPRC5CQ9NQ84 441 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 APEX2Q9UBZ4 518 aa17.63■□□□□ 0.41
TRIM27-202ENST00000377199 SMIM23A6NLE4 172 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 PADI6Q6TGC4 694 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 MIER3Q7Z3K6 550 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 SLC5A5Q92911 643 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 GREB1LQ9C091 1923 aaPredicted RBP17.62■□□□□ 0.41
TRIM27-202ENST00000377199 PIK3CDO00329 1044 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 NFIBO00712 420 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 EIF3DO15371 548 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRIM27-202ENST00000377199 ITGB5P18084 799 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 CORO7P57737 925 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 BFSP1Q12934 665 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 PPP2R5CQ13362 524 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 DLGAP5Q15398 846 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 SYCE1Q8N0S2 351 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 ATP6V1G3Q96LB4 118 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 CTTNBP2NLQ9P2B4 639 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 CCPG1Q9ULG6 757 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 ATP8A1Q9Y2Q0 1164 aa17.62■□□□□ 0.41
TRIM27-202ENST00000377199 ENTPD3O75355 529 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 MYZAPP0CAP1 466 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 HDLBPQ00341 1268 aaKnown RBP17.61■□□□□ 0.41
TRIM27-202ENST00000377199 UAP1Q16222 522 aaPredicted RBP17.61■□□□□ 0.41
TRIM27-202ENST00000377199 UHMK1Q8TAS1 419 aaKnown RBP17.61■□□□□ 0.41
TRIM27-202ENST00000377199 CCDC127Q96BQ5 260 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 GPR88Q9GZN0 384 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 LRRC4CQ9HCJ2 640 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 TMX2Q9Y320 296 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 SLC26A4O43511 780 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 SORBS3O60504 671 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 LMNB1P20700 586 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 LSP1P33241 339 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 DHX9Q08211 1270 aaKnown RBP17.61■□□□□ 0.41
TRIM27-202ENST00000377199 DCAF12L1Q5VU92 463 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 STXBP4Q6ZWJ1 553 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 ARHGEF19Q8IW93 802 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 DAW1Q8N136 415 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 FAM84AQ96KN4 292 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 COG5Q9UP83 839 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 MRPL11Q9Y3B7 192 aaKnown RBP17.61■□□□□ 0.41
TRIM27-202ENST00000377199 STK24Q9Y6E0 443 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 NRXN2Q9P2S2 1712 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 C10orf71Q711Q0 1435 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 BTNL10A8MVZ5 291 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 ALAS1P13196 640 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 TMOD1P28289 359 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 PDE4CQ08493 712 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 PACS2Q86VP3 889 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 CHURC1Q8WUH1 139 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 RFFLQ8WZ73 363 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 KIFC3Q9BVG8 833 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 ERVK-5Q9HDB9 667 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 COL20A1Q9P218 1284 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 SUCLA2Q9P2R7 463 aaPredicted RBP17.61■□□□□ 0.41
TRIM27-202ENST00000377199 FRMPD4Q14CM0 1322 aa17.61■□□□□ 0.41
TRIM27-202ENST00000377199 E7EVH7 732 aa17.6■□□□□ 0.41
TRIM27-202ENST00000377199 MAGEA9P43362 315 aa17.6■□□□□ 0.41
TRIM27-202ENST00000377199 MARCKSL1P49006 195 aa17.6■□□□□ 0.41
TRIM27-202ENST00000377199 OGFOD1Q8N543 542 aa17.6■□□□□ 0.41
TRIM27-202ENST00000377199 AKT1S1Q96B36 256 aa17.6■□□□□ 0.41
TRIM27-202ENST00000377199 ZNF277Q9NRM2 450 aaPredicted RBP17.6■□□□□ 0.41
TRIM27-202ENST00000377199 KCNH7Q9NS40 1196 aa17.6■□□□□ 0.41
TRIM27-202ENST00000377199 UTP11Q9Y3A2 253 aaKnown RBP17.6■□□□□ 0.41
TRIM27-202ENST00000377199 PCNTO95613 3336 aa17.6■□□□□ 0.41
TRIM27-202ENST00000377199 VIL1P09327 827 aaKnown RBP17.6■□□□□ 0.41
TRIM27-202ENST00000377199 MYCLP12524 364 aaPredicted RBP17.6■□□□□ 0.41
TRIM27-202ENST00000377199 EIF2AK2P19525 551 aaKnown RBP17.6■□□□□ 0.41
TRIM27-202ENST00000377199 PPP3CAQ08209 521 aa17.6■□□□□ 0.41
TRIM27-202ENST00000377199 MESDQ14696 234 aa17.6■□□□□ 0.41
TRIM27-202ENST00000377199 CCDC26Q8TAB7 109 aa17.6■□□□□ 0.41
TRIM27-202ENST00000377199 BTBD6Q96KE9 485 aa17.6■□□□□ 0.41
TRIM27-202ENST00000377199 ZNF70Q9UC06 446 aaPredicted RBP17.6■□□□□ 0.41
TRIM27-202ENST00000377199 QSER1Q2KHR3 1735 aa17.59■□□□□ 0.41
TRIM27-202ENST00000377199 SPDYE2BA6NHP3 402 aa17.59■□□□□ 0.41
TRIM27-202ENST00000377199 DCDC2CA8MYV0 355 aa17.59■□□□□ 0.41
TRIM27-202ENST00000377199 SPDYE6P0CI01 402 aa17.59■□□□□ 0.41
TRIM27-202ENST00000377199 SP4Q02446 784 aa17.59■□□□□ 0.41
TRIM27-202ENST00000377199 IFFO1Q0D2I5 559 aa17.59■□□□□ 0.41
TRIM27-202ENST00000377199 PPM1KQ8N3J5 372 aa17.59■□□□□ 0.41
TRIM27-202ENST00000377199 ALG3Q92685 438 aa17.59■□□□□ 0.41
TRIM27-202ENST00000377199 HES6Q96HZ4 224 aa17.59■□□□□ 0.41
TRIM27-202ENST00000377199 MRIQ9BWK5 157 aa17.59■□□□□ 0.41
TRIM27-202ENST00000377199 COL11A2P13942 1736 aaPredicted RBP17.59■□□□□ 0.41
TRIM27-202ENST00000377199 GTPBP10A4D1E9 387 aaKnown RBP17.59■□□□□ 0.41
TRIM27-202ENST00000377199 SLC16A4O15374 487 aa17.59■□□□□ 0.41
TRIM27-202ENST00000377199 CALCAP01258 141 aa17.59■□□□□ 0.41
TRIM27-202ENST00000377199 FTLP02792 175 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms