RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 THSD7AQ9UPZ6 1657 aa14.34□□□□□ -0.11
ACTN1-202ENST00000376839 PPP1R12BO60237 982 aaPredicted RBP14.33□□□□□ -0.11
ACTN1-202ENST00000376839 SHBGP04278 402 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 MNAT1P51948 309 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 ACTN3Q08043 901 aaPredicted RBP14.33□□□□□ -0.11
ACTN1-202ENST00000376839 OTOP1Q7RTM1 612 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 CCDC13Q8IYE1 715 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 SPICE1Q8N0Z3 855 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 BANK1Q8NDB2 785 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 EPB41L4BQ9H329 900 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 VCPKMTQ9H867 229 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 DBNDD1Q9H9R9 158 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 PARVGQ9HBI0 331 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 AGPAT3Q9NRZ7 376 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 WRAP73Q9P2S5 460 aaPredicted RBP14.33□□□□□ -0.11
ACTN1-202ENST00000376839 GGA2Q9UJY4 613 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 STK24Q9Y6E0 443 aa14.33□□□□□ -0.11
ACTN1-202ENST00000376839 PPFIA2O75334 1257 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 DR1Q01658 176 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 SLC15A2Q16348 729 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 MDM1Q8TC05 714 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 ZDHHC15Q96MV8 337 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 USP21Q9UK80 565 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 CAND2O75155 1236 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 CYP3A4P08684 503 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 UBXN2AP68543 259 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 IFFO1Q0D2I5 559 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 BYSLQ13895 437 aaKnown RBP14.33□□□□□ -0.12
ACTN1-202ENST00000376839 DUPD1Q68J44 220 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 PHLDB3Q6NSJ2 640 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 TATDN1Q6P1N9 297 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 TMEM179Q6ZVK1 233 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 ZNF720Q7Z2F6 126 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 RDH13Q8NBN7 331 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 SLC20A1Q8WUM9 679 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 GMCL1Q96IK5 515 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 CABS1Q96KC9 395 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 OSBPL7Q9BZF2 842 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 CARD9Q9H257 536 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 ZDHHC18Q9NUE0 388 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 APEX2Q9UBZ4 518 aa14.33□□□□□ -0.12
ACTN1-202ENST00000376839 G3V3G9 751 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 PAEPP09466 180 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 BMP3P12645 472 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 TNFAIP3P21580 790 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 RBM5P52756 815 aaKnown RBP eCLIP14.32□□□□□ -0.12
ACTN1-202ENST00000376839 MYL7Q01449 175 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 NFIL3Q16649 462 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 ABCB5Q2M3G0 1257 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 DCAF8Q5TAQ9 597 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 LRCH2Q5VUJ6 765 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 FAM178BQ8IXR5 827 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 GMCL1P1Q8NEA9 526 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 CEP89Q96ST8 783 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 PSMD1Q99460 953 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 ERP44Q9BS26 406 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 MKNK1Q9BUB5 465 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 DMAC2Q9NW81 257 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 A0A1W2PRG0 241 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 PHF20L1A8MW92 1017 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 FOXN3O00409 490 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-202ENST00000376839 PSMD10O75832 226 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 UBAP2Q5T6F2 1119 aaKnown RBP14.32□□□□□ -0.12
ACTN1-202ENST00000376839 HS2ST1Q7LGA3 356 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 TLCD1Q96CP7 247 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 SEC16BQ96JE7 1060 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 RAB17Q9H0T7 212 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 PNMA2Q9UL42 364 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 SNX24Q9Y343 169 aa14.32□□□□□ -0.12
ACTN1-202ENST00000376839 GH2P01242 217 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 MARCKSL1P49006 195 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 RRP1BQ14684 758 aaKnown RBP14.31□□□□□ -0.12
ACTN1-202ENST00000376839 SWT1Q5T5J6 900 aaKnown RBP14.31□□□□□ -0.12
ACTN1-202ENST00000376839 ZDHHC24Q6UX98 284 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 JAMLQ86YT9 394 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 KRT35Q92764 455 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 GOPCQ9HD26 462 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 TUFT1Q9NNX1 390 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 CHORDC1Q9UHD1 332 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-202ENST00000376839 PRR12Q9ULL5 1215 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 FRMD4BQ9Y2L6 1034 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 DAAM1Q9Y4D1 1078 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 LTBP4Q8N2S1 1624 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 NRXN2Q9P2S2 1712 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 C5orf60A6NFR6 353 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 CFBP00751 764 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 VCAM1P19320 739 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 PLTPP55058 493 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 ODR4Q5SWX8 454 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 CCDC121Q6ZUS5 278 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 C18orf8Q96DM3 657 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 HOOK2Q96ED9 719 aa14.31□□□□□ -0.12
ACTN1-202ENST00000376839 ANKRD62A6NC57 917 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 DNM1LO00429 736 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 ZNF131P52739 623 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 DLG4P78352 724 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 LMO3Q8TAP4 145 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 FBXO25Q8TCJ0 367 aa14.3□□□□□ -0.12
ACTN1-202ENST00000376839 TATDN2Q93075 761 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms