RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 STK39Q9UEW8 545 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 SNX9Q9Y5X1 595 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 SF3B1O75533 1304 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 E7ENQ6 273 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 LRRC74AQ0VAA2 488 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 BST2Q10589 180 aaKnown RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 PRPSAP1Q14558 356 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 SMCO1Q147U7 214 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 SLC9C2Q5TAH2 1124 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 TBC1D9BQ66K14 1250 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 RGS9BPQ6ZS82 235 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 CAMK1DQ8IU85 385 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 UXS1Q8NBZ7 420 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 MYRFLQ96LU7 910 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 ANKRD27Q96NW4 1050 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 S100A13Q99584 98 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 CNNM1Q9NRU3 951 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 NDUFA13Q9P0J0 144 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 NSFL1CQ9UNZ2 370 aaKnown RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 PITPNM2Q9BZ72 1349 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 KLHL41O60662 606 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 BCAR1P56945 870 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 MOGSQ13724 837 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 GALNT3Q14435 633 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 PLCL1Q15111 1095 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 DCUN1D2Q6PH85 259 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 CIR1Q86X95 450 aaPredicted RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 CRACR2BQ8N4Y2 399 aaPredicted RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 FAM133AQ8N9E0 248 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 PDCD6IPQ8WUM4 868 aaKnown RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 GGNBP2Q9H3C7 697 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 LRRC40Q9H9A6 602 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 TMEM161AQ9NX61 479 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 HACD3Q9P035 362 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 ING4Q9UNL4 249 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 CCDC154A6NI56 674 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 IKBKBO14920 756 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 PSTPIP1O43586 416 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 NOL4O94818 638 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 ZNF24P17028 368 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 IL12AP29459 219 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 HECTD3Q5T447 861 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 C4orf50Q6ZRC1 276 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 MOB1BQ7L9L4 216 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 CROCCP3Q8IVE0 287 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 INPP5DQ92835 1189 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 ZBTB9Q96C00 473 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 ZFRQ96KR1 1074 aaKnown RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 CLCC1Q96S66 551 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 EPB41L5Q9HCM4 733 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 THRAP3Q9Y2W1 955 aaKnown RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 CBY1Q9Y3M2 126 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 KPNA5O15131 536 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 KRT9P35527 623 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 HSF2Q03933 536 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 GALNT6Q8NCL4 622 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 SHCBP1Q8NEM2 672 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 PAGR1Q9BTK6 254 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 ANGPT4Q9Y264 503 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 PTPN22Q9Y2R2 807 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 GPC6Q9Y625 555 aaPredicted RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 KCNQ3O43525 872 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 SSNA1O43805 119 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 ATXN8OSP0DMR3 200 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 ACAT1P24752 427 aaKnown RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 ABL2P42684 1182 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 GUCY2FP51841 1108 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 KPNA1P52294 538 aaPredicted RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 RAD51Q06609 339 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 ATP1A4Q13733 1029 aa6.32□□□□□ -1.4
SCN2A-202ENST00000375427 CCDC85AQ96PX6 553 aaPredicted RBP6.32□□□□□ -1.4
SCN2A-202ENST00000375427 CCT8L1PA6NM43 557 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 IFIT3O14879 490 aaKnown RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 GNAI1P63096 354 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 ILF2Q12905 390 aaKnown RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 KPNB1Q14974 876 aaKnown RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 RRAGBQ5VZM2 374 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 CDKL3Q8IVW4 592 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 HEXDCQ8WVB3 486 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 ITFG2Q969R8 447 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 MAGED1Q9Y5V3 778 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 CLCA4Q14CN2 919 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 KNOP1Q1ED39 458 aaKnown RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 RBM20Q5T481 1227 aaKnown RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 GTF2IRD2BQ6EKJ0 949 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 GTF2IRD2Q86UP8 949 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 PJA1Q8NG27 643 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 UBN1Q9NPG3 1134 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 MCM8Q9UJA3 840 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 FAM32AQ9Y421 112 aaKnown RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 TMCC2O75069 709 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 PSME1Q06323 249 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 DEF8Q6ZN54 512 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 PEX26Q7Z412 305 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 ERICH1Q86X53 443 aa6.31□□□□□ -1.4
SCN2A-202ENST00000375427 GPBP1L1Q9HC44 474 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-202ENST00000375427 KLHL1Q9NR64 748 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms