RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 SPANXN2Q5MJ10 180 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 TRIM39Q9HCM9 518 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 GIN1Q9NXP7 522 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 S100A6P06703 90 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 PCNAP12004 261 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 KRT28Q7Z3Y7 464 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 C1orf131Q8NDD1 294 aaKnown RBP7.03□□□□□ -1.28
UBR4-204ENST00000375254 DQX1Q8TE96 717 aaKnown RBP7.03□□□□□ -1.28
UBR4-204ENST00000375254 PRMT1Q99873 361 aaKnown RBP7.03□□□□□ -1.28
UBR4-204ENST00000375254 STX8Q9UNK0 236 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 CNOT3O75175 753 aaKnown RBP7.03□□□□□ -1.28
UBR4-204ENST00000375254 TTC38Q5R3I4 469 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 DSTYKQ6XUX3 929 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 PDPRQ8NCN5 879 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 BTBD6Q96KE9 485 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 ACAP3Q96P50 834 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 DPH5Q9H2P9 285 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 KLHL3Q9UH77 587 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 SBNO1A3KN83 1393 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 ZC3H12BQ5HYM0 836 aaKnown RBP7.03□□□□□ -1.28
UBR4-204ENST00000375254 RGS9BPQ6ZS82 235 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 CDAN1Q8IWY9 1227 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 ZNF710Q8N1W2 664 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 TSPYL6Q8N831 410 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 THTPAQ9BU02 230 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 WNT8AQ9H1J5 351 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 STAP2Q9UGK3 403 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 ECM2O94769 699 aaPredicted RBP7.03□□□□□ -1.28
UBR4-204ENST00000375254 IST1P53990 364 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 ACAP2Q15057 778 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 GALNT6Q8NCL4 622 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 LINC00301Q8NCQ3 95 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 UBE2OQ9C0C9 1292 aaKnown RBP7.03□□□□□ -1.28
UBR4-204ENST00000375254 SERPINB13Q9UIV8 391 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 APOL3O95236 402 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 PAX3P23760 479 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 VCPP55072 806 aaKnown RBP7.03□□□□□ -1.28
UBR4-204ENST00000375254 UNC13DQ70J99 1090 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 STAG2Q8N3U4 1231 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 SSH2Q76I76 1423 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 FAM45BPQ6NSW5 357 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 MB21D1Q8N884 522 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 ISCUQ9H1K1 167 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 TMEM245Q9H330 911 aa7.03□□□□□ -1.28
UBR4-204ENST00000375254 PTGS2P35354 604 aa7.02□□□□□ -1.28
UBR4-204ENST00000375254 HP1BP3Q5SSJ5 553 aaPredicted RBP7.02□□□□□ -1.28
UBR4-204ENST00000375254 ZNF618Q5T7W0 954 aa7.02□□□□□ -1.28
UBR4-204ENST00000375254 SPICE1Q8N0Z3 855 aa7.02□□□□□ -1.28
UBR4-204ENST00000375254 PHF21AQ96BD5 680 aa7.02□□□□□ -1.28
UBR4-204ENST00000375254 STK39Q9UEW8 545 aa7.02□□□□□ -1.28
UBR4-204ENST00000375254 CDV3Q9UKY7 258 aaKnown RBP7.02□□□□□ -1.28
UBR4-204ENST00000375254 CABP4P57796 275 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 THEMIS2Q5TEJ8 643 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 SNX30Q5VWJ9 437 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 CAVIN3Q969G5 261 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 TUBGCP5Q96RT8 1024 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 CARD14Q9BXL6 1004 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 CACNA2D2Q9NY47 1150 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 NCOA1Q15788 1441 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 YWHAGP61981 247 aaKnown RBP eCLIP7.02□□□□□ -1.29
UBR4-204ENST00000375254 TIMM50Q3ZCQ8 353 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 DEPDC1Q5TB30 811 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 LSM14BQ9BX40 385 aaKnown RBP7.02□□□□□ -1.29
UBR4-204ENST00000375254 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.02□□□□□ -1.29
UBR4-204ENST00000375254 HDAC6Q9UBN7 1215 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 MSH6P52701 1360 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 RAD51BO15315 384 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 PLEKHM3Q6ZWE6 761 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 TRIM50Q86XT4 487 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 TEX13BQ9BXU2 312 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 V9GY48 417 aaPredicted RBP7.02□□□□□ -1.29
UBR4-204ENST00000375254 TK2O00142 265 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 NPR1P16066 1061 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 C2orf54Q08AI8 447 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 UNC45BQ8IWX7 931 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 SH3KBP1Q96B97 665 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 RPS6KC1Q96S38 1066 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 MYOM3Q5VTT5 1437 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 WFS1O76024 890 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 OATP04181 439 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 NAPAP54920 295 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 RSBN1Q5VWQ0 802 aaPredicted RBP7.02□□□□□ -1.29
UBR4-204ENST00000375254 E4F1Q66K89 784 aaPredicted RBP7.02□□□□□ -1.29
UBR4-204ENST00000375254 TMPRSS6Q8IU80 811 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 VPS37AQ8NEZ2 397 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 MBIPQ9NS73 344 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 SNX12Q9UMY4 172 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 MYRFQ9Y2G1 1151 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 SOWAHDA6NJG2 315 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 EPN2O95208 641 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 ADAM9Q13443 819 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 TOP3AQ13472 1001 aaPredicted RBP7.02□□□□□ -1.29
UBR4-204ENST00000375254 MAN2A1Q16706 1144 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 FAR2Q96K12 515 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 CYP26B1Q9NR63 512 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 GRM8O00222 908 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 PLCG2P16885 1265 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 SLC1A1P43005 524 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 TXNDC2Q86VQ3 553 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 TMA7Q9Y2S6 64 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms