RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 DDX50Q9BQ39 737 aaKnown RBP8.56□□□□□ -1.04
USP48-203ENST00000374732 VPS11Q9H270 941 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 ACAD9Q9H845 621 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 SDHAF3Q9NRP4 125 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 RHBDL2Q9NX52 303 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 CPDO75976 1380 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 SLIT3O75094 1523 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 A8MVJ9 347 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 IDH1O75874 414 aaKnown RBP8.56□□□□□ -1.04
USP48-203ENST00000374732 LTA4HP09960 611 aaKnown RBP8.56□□□□□ -1.04
USP48-203ENST00000374732 PHKA1P46020 1223 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 LMAN1P49257 510 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 MRPS15P82914 257 aaKnown RBP8.56□□□□□ -1.04
USP48-203ENST00000374732 PICALMQ13492 652 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 CCDC38Q502W7 563 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 NEPROQ6NW34 567 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 ZNF619Q8N2I2 560 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 PIP4K2CQ8TBX8 421 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 EPS8L1Q8TE68 723 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 ZFAND2BQ8WV99 257 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 SGK3Q96BR1 496 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 ZNF594Q96JF6 807 aaPredicted RBP8.56□□□□□ -1.04
USP48-203ENST00000374732 CABS1Q96KC9 395 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 BTBD6Q96KE9 485 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 NLRP4Q96MN2 994 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 EYA1Q99502 592 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 TSC22D3Q99576 134 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 ELAC1Q9H777 363 aaKnown RBP8.56□□□□□ -1.04
USP48-203ENST00000374732 PSTPIP2Q9H939 334 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 C8orf4Q9NR00 106 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 GRID1Q9ULK0 1009 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 C15orf41Q9Y2V0 281 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 GMEB1Q9Y692 573 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 UBXN8O00124 270 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 ZBTB7BO15156 539 aaPredicted RBP8.56□□□□□ -1.04
USP48-203ENST00000374732 APOEP02649 317 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 P4HBP07237 508 aaKnown RBP8.56□□□□□ -1.04
USP48-203ENST00000374732 RPL9P32969 192 aaKnown RBP8.56□□□□□ -1.04
USP48-203ENST00000374732 ECE1P42892 770 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 CCR3P51677 355 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 TWISTNBQ3B726 338 aaPredicted RBP8.56□□□□□ -1.04
USP48-203ENST00000374732 PPP1R42Q7Z4L9 355 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 MAB21L3Q8N8X9 362 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 PXYLP1Q8TE99 480 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 PPP2R3CQ969Q6 453 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 SUCLG2Q96I99 432 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 USP16Q9Y5T5 823 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 MAP3K5Q99683 1374 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 CHURC1-FNTBB4DL54 471 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 PDE8AO60658 829 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 TMCC1O94876 653 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 HSPA6P17066 643 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 XPAP23025 273 aaPredicted RBP8.55□□□□□ -1.04
USP48-203ENST00000374732 ACADSBP45954 432 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 PLOD1Q02809 727 aaPredicted RBP8.55□□□□□ -1.04
USP48-203ENST00000374732 CLEC2AQ6UVW9 174 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 ABRAXAS1Q6UWZ7 409 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 TPTE2Q6XPS3 522 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 ARHGAP36Q6ZRI8 547 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 NUP54Q7Z3B4 507 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 EPHX4Q8IUS5 362 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 LSMEM2Q8N112 164 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 KCNH5Q8NCM2 988 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 NSUN6Q8TEA1 469 aaKnown RBP8.55□□□□□ -1.04
USP48-203ENST00000374732 IRGQQ8WZA9 623 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 SYNDIG1Q9H7V2 258 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 CCDC177Q9NQR7 707 aaPredicted RBP8.55□□□□□ -1.04
USP48-203ENST00000374732 JAG2Q9Y219 1238 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 PCDHGA2Q9Y5H1 932 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 ZNF536O15090 1300 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 RSPH10B2B2RC85 870 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 H0Y626 953 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 NVLO15381 856 aaKnown RBP8.55□□□□□ -1.04
USP48-203ENST00000374732 TREHO43280 583 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 CYTH3O43739 400 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 GLI1P08151 1106 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 RSPH10BP0C881 870 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 HPGDP15428 266 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 GPC3P51654 580 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 CENPCQ03188 943 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 KLC1Q07866 573 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 KIF5AQ12840 1032 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 SULT6B1Q6IMI4 303 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 CNSTQ6PJW8 725 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 UNC5CLQ8IV45 518 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 CCDC170Q8IYT3 715 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 GALNT15Q8N3T1 639 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 TRPC4APQ8TEL6 797 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 OSCP1Q8WVF1 389 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 CRISPLD2Q9H0B8 497 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 ANTXR1Q9H6X2 564 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 DMTF1Q9Y222 760 aa8.55□□□□□ -1.04
USP48-203ENST00000374732 SYNJ2BP-COX16A0A087WUM0 186 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 HNRNPCL2B2RXH8 293 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 GREM1O60565 184 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 HNRNPCL1O60812 293 aaKnown RBP8.54□□□□□ -1.04
USP48-203ENST00000374732 PFDN1O60925 122 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 SOCS5O75159 536 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 PMLP29590 882 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 CPT1AP50416 773 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms