RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 KSR1Q8IVT5 923 aa17.78■□□□□ 0.44
HDAC8-208ENST00000373583 IGSF22Q8N9C0 903 aa17.78■□□□□ 0.44
HDAC8-208ENST00000373583 PRPF31Q8WWY3 499 aaKnown RBP17.78■□□□□ 0.44
HDAC8-208ENST00000373583 TMEM143Q96AN5 459 aa17.78■□□□□ 0.44
HDAC8-208ENST00000373583 CCDC43Q96MW1 224 aaKnown RBP17.78■□□□□ 0.44
HDAC8-208ENST00000373583 TRAIPQ9BWF2 469 aa17.78■□□□□ 0.44
HDAC8-208ENST00000373583 RAB34Q9BZG1 259 aa17.78■□□□□ 0.44
HDAC8-208ENST00000373583 CHST12Q9NRB3 414 aa17.78■□□□□ 0.44
HDAC8-208ENST00000373583 DACT1Q9NYF0 836 aa17.78■□□□□ 0.44
HDAC8-208ENST00000373583 STK24Q9Y6E0 443 aa17.78■□□□□ 0.44
HDAC8-208ENST00000373583 FGFR4P22455 802 aa17.77■□□□□ 0.44
HDAC8-208ENST00000373583 CTNNB1P35222 781 aa17.77■□□□□ 0.44
HDAC8-208ENST00000373583 BMPR1AP36894 532 aa17.77■□□□□ 0.44
HDAC8-208ENST00000373583 MXD4Q14582 209 aaPredicted RBP17.77■□□□□ 0.44
HDAC8-208ENST00000373583 LARP1BQ659C4 914 aaKnown RBP17.77■□□□□ 0.44
HDAC8-208ENST00000373583 SRGAP1Q7Z6B7 1085 aa17.77■□□□□ 0.44
HDAC8-208ENST00000373583 PIGOQ8TEQ8 1089 aa17.77■□□□□ 0.44
HDAC8-208ENST00000373583 NACC1Q96RE7 527 aa17.77■□□□□ 0.44
HDAC8-208ENST00000373583 C11orf84Q9BUA3 381 aaPredicted RBP17.77■□□□□ 0.44
HDAC8-208ENST00000373583 PLVAPQ9BX97 442 aa17.77■□□□□ 0.44
HDAC8-208ENST00000373583 BMP2KQ9NSY1 1161 aaPredicted RBP17.77■□□□□ 0.44
HDAC8-208ENST00000373583 MRPL42Q9Y6G3 142 aaKnown RBP17.77■□□□□ 0.44
HDAC8-208ENST00000373583 A0A0U1RQF3 1178 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 HOXA2O43364 376 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 CSDE1O75534 798 aaKnown RBP17.76■□□□□ 0.43
HDAC8-208ENST00000373583 PDCP20941 246 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 ATP2C1P98194 919 aaPredicted RBP17.76■□□□□ 0.43
HDAC8-208ENST00000373583 POU5F1BQ06416 359 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 CCDC85BQ15834 202 aaPredicted RBP17.76■□□□□ 0.43
HDAC8-208ENST00000373583 PTPROQ16827 1216 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 POTEGQ6S5H5 508 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 ECHDC2Q86YB7 292 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 IFNLR1Q8IU57 520 aaPredicted RBP17.76■□□□□ 0.43
HDAC8-208ENST00000373583 MICALL1Q8N3F8 863 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 PPM1EQ8WY54 764 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 P2RX5Q93086 422 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 MRPL38Q96DV4 380 aaKnown RBP17.76■□□□□ 0.43
HDAC8-208ENST00000373583 INTS4Q96HW7 963 aaKnown RBP17.76■□□□□ 0.43
HDAC8-208ENST00000373583 AGPAT5Q9NUQ2 364 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 THEGQ9P2T0 379 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 LRWD1Q9UFC0 647 aa17.76■□□□□ 0.43
HDAC8-208ENST00000373583 K7ELQ4 463 aaPredicted RBP17.75■□□□□ 0.43
HDAC8-208ENST00000373583 ARL2P36404 184 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 PHKA2P46019 1235 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 GATMP50440 423 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 GPM6BQ13491 265 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 PCBP1Q15365 356 aaKnown RBP eCLIP17.75■□□□□ 0.43
HDAC8-208ENST00000373583 PAN2Q504Q3 1202 aaKnown RBP17.75■□□□□ 0.43
HDAC8-208ENST00000373583 NAALADL2Q58DX5 795 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 CATSPER4Q7RTX7 472 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 BRAPQ7Z569 592 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 ZNF598Q86UK7 904 aaKnown RBP17.75■□□□□ 0.43
HDAC8-208ENST00000373583 RNF149Q8NC42 400 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 MCPH1Q8NEM0 835 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 RSPH1Q8WYR4 309 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 NFKBIZQ9BYH8 718 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 LMAN2LQ9H0V9 348 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 RNF19AQ9NV58 838 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 PIN4Q9Y237 131 aaKnown RBP17.75■□□□□ 0.43
HDAC8-208ENST00000373583 A0A0C4DFX4 3053 aa17.75■□□□□ 0.43
HDAC8-208ENST00000373583 BRWD1Q9NSI6 2320 aa17.74■□□□□ 0.43
HDAC8-208ENST00000373583 USO1O60763 962 aaKnown RBP17.74■□□□□ 0.43
HDAC8-208ENST00000373583 EOMESO95936 686 aa17.74■□□□□ 0.43
HDAC8-208ENST00000373583 FGFR1P11362 822 aa17.74■□□□□ 0.43
HDAC8-208ENST00000373583 ATF7P17544 494 aaPredicted RBP17.74■□□□□ 0.43
HDAC8-208ENST00000373583 RAB27AP51159 221 aa17.74■□□□□ 0.43
HDAC8-208ENST00000373583 TFDP1Q14186 410 aa17.74■□□□□ 0.43
HDAC8-208ENST00000373583 TIGD5Q53EQ6 642 aa17.74■□□□□ 0.43
HDAC8-208ENST00000373583 FAM102BQ5T8I3 360 aa17.74■□□□□ 0.43
HDAC8-208ENST00000373583 TMEM117Q9H0C3 514 aa17.74■□□□□ 0.43
HDAC8-208ENST00000373583 MINDY3Q9H8M7 445 aa17.74■□□□□ 0.43
HDAC8-208ENST00000373583 MYH11P35749 1972 aa17.73■□□□□ 0.43
HDAC8-208ENST00000373583 TBKBP1A7MCY6 615 aa17.73■□□□□ 0.43
HDAC8-208ENST00000373583 SRGAP2CP0DJJ0 459 aa17.73■□□□□ 0.43
HDAC8-208ENST00000373583 SKIP12755 728 aa17.73■□□□□ 0.43
HDAC8-208ENST00000373583 CCT6AP40227 531 aaKnown RBP17.73■□□□□ 0.43
HDAC8-208ENST00000373583 PTENP60484 403 aa17.73■□□□□ 0.43
HDAC8-208ENST00000373583 CAPSQ13938 189 aa17.73■□□□□ 0.43
HDAC8-208ENST00000373583 IL17AQ16552 155 aa17.73■□□□□ 0.43
HDAC8-208ENST00000373583 ARL6IP4Q66PJ3 421 aaKnown RBP17.73■□□□□ 0.43
HDAC8-208ENST00000373583 TWF2Q6IBS0 349 aaKnown RBP17.73■□□□□ 0.43
HDAC8-208ENST00000373583 DTHD1Q6ZMT9 781 aa17.73■□□□□ 0.43
HDAC8-208ENST00000373583 ASAP3Q8TDY4 903 aa17.73■□□□□ 0.43
HDAC8-208ENST00000373583 SNX29Q8TEQ0 813 aa17.73■□□□□ 0.43
HDAC8-208ENST00000373583 ATXN2LQ8WWM7 1075 aaKnown RBP17.73■□□□□ 0.43
HDAC8-208ENST00000373583 SNX21Q969T3 373 aa17.73■□□□□ 0.43
HDAC8-208ENST00000373583 PRDM6Q9NQX0 595 aa17.73■□□□□ 0.43
HDAC8-208ENST00000373583 ARHGEF35A5YM69 484 aa17.72■□□□□ 0.43
HDAC8-208ENST00000373583 ZNF623O75123 536 aa17.72■□□□□ 0.43
HDAC8-208ENST00000373583 IBSPP21815 317 aaPredicted RBP17.72■□□□□ 0.43
HDAC8-208ENST00000373583 GLRA2P23416 452 aa17.72■□□□□ 0.43
HDAC8-208ENST00000373583 ECM1Q16610 540 aa17.72■□□□□ 0.43
HDAC8-208ENST00000373583 KRT79Q5XKE5 535 aa17.72■□□□□ 0.43
HDAC8-208ENST00000373583 LRRC43Q8N309 656 aa17.72■□□□□ 0.43
HDAC8-208ENST00000373583 CASD1Q96PB1 797 aa17.72■□□□□ 0.43
HDAC8-208ENST00000373583 POLR3FQ9H1D9 316 aaPredicted RBP17.72■□□□□ 0.43
HDAC8-208ENST00000373583 FAM105AQ9NUU6 356 aa17.72■□□□□ 0.43
HDAC8-208ENST00000373583 TDRD15B5MCY1 1934 aaKnown RBP17.71■□□□□ 0.43
HDAC8-208ENST00000373583 A0A087WWV3 80 aa17.71■□□□□ 0.43
HDAC8-208ENST00000373583 VPS37CA5D8V6 355 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms