RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 VSTM4Q8IW00 320 aa22.61■■□□□ 1.21
SYNC-201ENST00000373484 RETREG2Q8NC44 543 aa22.61■■□□□ 1.21
SYNC-201ENST00000373484 HSD3B7Q9H2F3 369 aa22.61■■□□□ 1.21
SYNC-201ENST00000373484 HOOK1Q9UJC3 728 aaKnown RBP22.61■■□□□ 1.21
SYNC-201ENST00000373484 SMIM35A0A1B0GVV1 85 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 EFCAB8A8MWE9 144 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 ARHGAP6O43182 974 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 CUTAO60888 179 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 CAND2O75155 1236 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 THPOP40225 353 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 CCL23P55773 120 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 PRPF38BQ5VTL8 546 aaKnown RBP22.6■■□□□ 1.21
SYNC-201ENST00000373484 RESP18Q5W5W9 173 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 OTUD6AQ7L8S5 288 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 SNX29Q8TEQ0 813 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 AK8Q96MA6 479 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 GDF15Q99988 308 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 SH2D3AQ9BRG2 576 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 ZNF446Q9NWS9 450 aa22.6■■□□□ 1.21
SYNC-201ENST00000373484 ZBTB39O15060 712 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 MAGEB2O15479 319 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 RPLP2P05387 115 aaKnown RBP22.59■■□□□ 1.21
SYNC-201ENST00000373484 IQCF3P0C7M6 154 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 SELPP16109 830 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 MARCKSP29966 332 aaPredicted RBP22.59■■□□□ 1.21
SYNC-201ENST00000373484 CDC25AP30304 524 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 CCT6AP40227 531 aaKnown RBP22.59■■□□□ 1.21
SYNC-201ENST00000373484 UBASH3AP57075 661 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 GRIN1Q05586 938 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 ZNF618Q5T7W0 954 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 KRT79Q5XKE5 535 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 TMEM199Q8N511 208 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 TET1Q8NFU7 2136 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 DNAJB3Q8WWF6 145 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 SCLYQ96I15 445 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 MMTAG2Q9BU76 263 aaKnown RBP22.59■■□□□ 1.21
SYNC-201ENST00000373484 CYP26B1Q9NR63 512 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 FBXO2Q9UK22 296 aaPredicted RBP22.59■■□□□ 1.21
SYNC-201ENST00000373484 A0A087WWV3 80 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 LONP1P36776 959 aaKnown RBP22.59■■□□□ 1.21
SYNC-201ENST00000373484 NPEPPSP55786 919 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 TBC1D8BQ0IIM8 1120 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 TRIM65Q6PJ69 517 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 TRAF7Q6Q0C0 670 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 POTEGQ6S5H5 508 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 LRRC8DQ7L1W4 858 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 UBXN4Q92575 508 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 ANKEF1Q9NU02 776 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 PPME1Q9Y570 386 aa22.59■■□□□ 1.21
SYNC-201ENST00000373484 SRPRBQ9Y5M8 271 aaKnown RBP22.59■■□□□ 1.21
SYNC-201ENST00000373484 ZRANB2O95218 330 aaKnown RBP eCLIP22.58■■□□□ 1.21
SYNC-201ENST00000373484 FPGSQ05932 587 aa22.58■■□□□ 1.21
SYNC-201ENST00000373484 ECM1Q16610 540 aa22.58■■□□□ 1.21
SYNC-201ENST00000373484 ERCC6LQ2NKX8 1250 aa22.58■■□□□ 1.21
SYNC-201ENST00000373484 RSPH3Q86UC2 560 aa22.58■■□□□ 1.21
SYNC-201ENST00000373484 LINC01465Q8N7H1 131 aa22.58■■□□□ 1.21
SYNC-201ENST00000373484 ZNF579Q8NAF0 562 aaKnown RBP22.58■■□□□ 1.21
SYNC-201ENST00000373484 ERCC4Q92889 916 aaPredicted RBP22.58■■□□□ 1.21
SYNC-201ENST00000373484 CEP170P1Q96L14 293 aa22.58■■□□□ 1.21
SYNC-201ENST00000373484 FAM49AQ9H0Q0 323 aaPredicted RBP22.58■■□□□ 1.21
SYNC-201ENST00000373484 CSF2RAP15509 400 aa22.57■■□□□ 1.2
SYNC-201ENST00000373484 CT47A1Q5JQC4 288 aaPredicted RBP22.57■■□□□ 1.2
SYNC-201ENST00000373484 PIGOQ8TEQ8 1089 aa22.57■■□□□ 1.2
SYNC-201ENST00000373484 NACC1Q96RE7 527 aa22.57■■□□□ 1.2
SYNC-201ENST00000373484 FHOD1Q9Y613 1164 aa22.57■■□□□ 1.2
SYNC-201ENST00000373484 IGKV6-21A0A0C4DH24 114 aa22.57■■□□□ 1.2
SYNC-201ENST00000373484 MAFO75444 373 aaPredicted RBP22.57■■□□□ 1.2
SYNC-201ENST00000373484 CLCN6P51797 869 aa22.57■■□□□ 1.2
SYNC-201ENST00000373484 XKR9Q5GH70 373 aa22.57■■□□□ 1.2
SYNC-201ENST00000373484 EFCAB12Q6NXP0 572 aa22.57■■□□□ 1.2
SYNC-201ENST00000373484 KIAA0319LQ8IZA0 1049 aa22.57■■□□□ 1.2
SYNC-201ENST00000373484 METTL13Q8N6R0 699 aa22.57■■□□□ 1.2
SYNC-201ENST00000373484 TADA3O75528 432 aa22.56■■□□□ 1.2
SYNC-201ENST00000373484 PARNO95453 639 aaKnown RBP22.56■■□□□ 1.2
SYNC-201ENST00000373484 RFC2P35250 354 aa22.56■■□□□ 1.2
SYNC-201ENST00000373484 RARRES1P49788 294 aa22.56■■□□□ 1.2
SYNC-201ENST00000373484 PPIGQ13427 754 aaKnown RBP eCLIP22.56■■□□□ 1.2
SYNC-201ENST00000373484 FAM26DQ5JW98 314 aa22.56■■□□□ 1.2
SYNC-201ENST00000373484 HYIQ5T013 277 aa22.56■■□□□ 1.2
SYNC-201ENST00000373484 REXO1L1PQ8IX06 675 aa22.56■■□□□ 1.2
SYNC-201ENST00000373484 NME8Q8N427 588 aa22.56■■□□□ 1.2
SYNC-201ENST00000373484 DHX33Q9H6R0 707 aaKnown RBP22.56■■□□□ 1.2
SYNC-201ENST00000373484 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.56■■□□□ 1.2
SYNC-201ENST00000373484 DACH1Q9UI36 760 aa22.56■■□□□ 1.2
SYNC-201ENST00000373484 DBR1Q9UK59 544 aaKnown RBP22.56■■□□□ 1.2
SYNC-201ENST00000373484 V9GYY5 206 aaPredicted RBP22.56■■□□□ 1.2
SYNC-201ENST00000373484 KDM3AQ9Y4C1 1321 aa22.55■■□□□ 1.2
SYNC-201ENST00000373484 RSPH10B2B2RC85 870 aa22.55■■□□□ 1.2
SYNC-201ENST00000373484 SERPINC1P01008 464 aa22.55■■□□□ 1.2
SYNC-201ENST00000373484 CTSHP09668 335 aa22.55■■□□□ 1.2
SYNC-201ENST00000373484 RSPH10BP0C881 870 aa22.55■■□□□ 1.2
SYNC-201ENST00000373484 BMP8BP34820 402 aa22.55■■□□□ 1.2
SYNC-201ENST00000373484 TBX2Q13207 712 aaPredicted RBP22.55■■□□□ 1.2
SYNC-201ENST00000373484 ARHGAP29Q52LW3 1261 aa22.55■■□□□ 1.2
SYNC-201ENST00000373484 TMCO3Q6UWJ1 677 aa22.55■■□□□ 1.2
SYNC-201ENST00000373484 LRRC71Q8N4P6 559 aa22.55■■□□□ 1.2
SYNC-201ENST00000373484 KRI1Q8N9T8 703 aaKnown RBP22.55■■□□□ 1.2
SYNC-201ENST00000373484 CSRNP2Q9H175 543 aa22.55■■□□□ 1.2
SYNC-201ENST00000373484 CALCOCO1Q9P1Z2 691 aa22.55■■□□□ 1.2
SYNC-201ENST00000373484 KIAA1024Q9UPX6 916 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms