RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 NEK9Q8TD19 979 aa16.78■□□□□ 0.28
C9orf16-201ENST00000372994 PRPF31Q8WWY3 499 aaKnown RBP16.78■□□□□ 0.28
C9orf16-201ENST00000372994 TRAIPQ9BWF2 469 aa16.78■□□□□ 0.28
C9orf16-201ENST00000372994 TMEM117Q9H0C3 514 aa16.78■□□□□ 0.28
C9orf16-201ENST00000372994 TMEM60Q9H2L4 133 aa16.78■□□□□ 0.28
C9orf16-201ENST00000372994 IFT122Q9HBG6 1241 aa16.78■□□□□ 0.28
C9orf16-201ENST00000372994 RNF19AQ9NV58 838 aa16.78■□□□□ 0.28
C9orf16-201ENST00000372994 TYW1Q9NV66 732 aaKnown RBP16.78■□□□□ 0.28
C9orf16-201ENST00000372994 DACT1Q9NYF0 836 aa16.78■□□□□ 0.28
C9orf16-201ENST00000372994 NCK2O43639 380 aa16.77■□□□□ 0.28
C9orf16-201ENST00000372994 SFPQP23246 707 aaKnown RBP eCLIP16.77■□□□□ 0.28
C9orf16-201ENST00000372994 DNAJB1P25685 340 aa16.77■□□□□ 0.28
C9orf16-201ENST00000372994 POLGP54098 1239 aaPredicted RBP16.77■□□□□ 0.28
C9orf16-201ENST00000372994 ORC2Q13416 577 aaPredicted RBP16.77■□□□□ 0.28
C9orf16-201ENST00000372994 LEXMQ3ZCV2 418 aa16.77■□□□□ 0.28
C9orf16-201ENST00000372994 XKR9Q5GH70 373 aa16.77■□□□□ 0.28
C9orf16-201ENST00000372994 FAM184AQ8NB25 1140 aa16.77■□□□□ 0.28
C9orf16-201ENST00000372994 PSPC1Q8WXF1 523 aaKnown RBP16.77■□□□□ 0.28
C9orf16-201ENST00000372994 TMEM143Q96AN5 459 aa16.77■□□□□ 0.28
C9orf16-201ENST00000372994 PABPC5Q96DU9 382 aaKnown RBP16.77■□□□□ 0.28
C9orf16-201ENST00000372994 CASD1Q96PB1 797 aa16.77■□□□□ 0.28
C9orf16-201ENST00000372994 CWH43Q9H720 699 aa16.77■□□□□ 0.28
C9orf16-201ENST00000372994 AAASQ9NRG9 546 aa16.77■□□□□ 0.28
C9orf16-201ENST00000372994 ANKEF1Q9NU02 776 aa16.77■□□□□ 0.28
C9orf16-201ENST00000372994 PCDHB12Q9Y5F1 795 aa16.77■□□□□ 0.28
C9orf16-201ENST00000372994 COL4A3BPQ9Y5P4 624 aa16.77■□□□□ 0.28
C9orf16-201ENST00000372994 ASAP2O43150 1006 aa16.76■□□□□ 0.27
C9orf16-201ENST00000372994 XRCC6P12956 609 aaKnown RBP eCLIP16.76■□□□□ 0.27
C9orf16-201ENST00000372994 ATP2B1P20020 1258 aa16.76■□□□□ 0.27
C9orf16-201ENST00000372994 KCNA5P22460 613 aa16.76■□□□□ 0.27
C9orf16-201ENST00000372994 MCM7P33993 719 aa16.76■□□□□ 0.27
C9orf16-201ENST00000372994 NOSTRINQ8IVI9 506 aa16.76■□□□□ 0.27
C9orf16-201ENST00000372994 TCP11Q8WWU5 503 aa16.76■□□□□ 0.27
C9orf16-201ENST00000372994 NLRP4Q96MN2 994 aa16.76■□□□□ 0.27
C9orf16-201ENST00000372994 ARID2Q68CP9 1835 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 ST18O60284 1047 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 ATF7P17544 494 aaPredicted RBP16.75■□□□□ 0.27
C9orf16-201ENST00000372994 LAMTOR4Q0VGL1 99 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 HYAL1Q12794 435 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 EMC2Q15006 297 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 CSPP1Q1MSJ5 1256 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 CTC1Q2NKJ3 1217 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 LRRC55Q6ZSA7 311 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 SRGAP1Q7Z6B7 1085 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 FERMT3Q86UX7 667 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.75■□□□□ 0.27
C9orf16-201ENST00000372994 POF1BQ8WVV4 589 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 NECAB3Q96P71 396 aaPredicted RBP16.75■□□□□ 0.27
C9orf16-201ENST00000372994 PLXNA4Q9HCM2 1894 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 C5orf42Q9H799 3197 aa16.75■□□□□ 0.27
C9orf16-201ENST00000372994 POTEMA6NI47 508 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 ZNF623O75123 536 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 SRGAP2CP0DJJ0 459 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 SPATA31C1P0DKV0 1188 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 SKIP12755 728 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 LAG3P18627 525 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 U2AF2P26368 475 aaKnown RBP eCLIP16.74■□□□□ 0.27
C9orf16-201ENST00000372994 PHKA2P46019 1235 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 TRAPPC10P48553 1259 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 UBE3AQ05086 875 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 ZNF174Q15697 407 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 CLLU1OSQ5K130 101 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 SPOUT1Q5T280 376 aaKnown RBP16.74■□□□□ 0.27
C9orf16-201ENST00000372994 CATSPER4Q7RTX7 472 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 ABI1Q8IZP0 508 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 COLGALT1Q8NBJ5 622 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 RSPH1Q8WYR4 309 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 MTRQ99707 1265 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 UPF2Q9HAU5 1272 aaKnown RBP16.74■□□□□ 0.27
C9orf16-201ENST00000372994 XPNPEP1Q9NQW7 623 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 HCSTQ9UBK5 93 aa16.74■□□□□ 0.27
C9orf16-201ENST00000372994 DGAT1O75907 488 aa16.73■□□□□ 0.27
C9orf16-201ENST00000372994 FGF18O76093 207 aa16.73■□□□□ 0.27
C9orf16-201ENST00000372994 LTBRP36941 435 aa16.73■□□□□ 0.27
C9orf16-201ENST00000372994 RARRES1P49788 294 aa16.73■□□□□ 0.27
C9orf16-201ENST00000372994 POU5F1BQ06416 359 aa16.73■□□□□ 0.27
C9orf16-201ENST00000372994 MXD4Q14582 209 aaPredicted RBP16.73■□□□□ 0.27
C9orf16-201ENST00000372994 PUS10Q3MIT2 529 aaKnown RBP16.73■□□□□ 0.27
C9orf16-201ENST00000372994 TTC38Q5R3I4 469 aa16.73■□□□□ 0.27
C9orf16-201ENST00000372994 TWF2Q6IBS0 349 aaKnown RBP16.73■□□□□ 0.27
C9orf16-201ENST00000372994 CATSPER3Q86XQ3 398 aa16.73■□□□□ 0.27
C9orf16-201ENST00000372994 LRRC43Q8N309 656 aa16.73■□□□□ 0.27
C9orf16-201ENST00000372994 RNF169Q8NCN4 708 aa16.73■□□□□ 0.27
C9orf16-201ENST00000372994 MINDY3Q9H8M7 445 aa16.73■□□□□ 0.27
C9orf16-201ENST00000372994 TUFT1Q9NNX1 390 aa16.73■□□□□ 0.27
C9orf16-201ENST00000372994 BMP2KQ9NSY1 1161 aaPredicted RBP16.73■□□□□ 0.27
C9orf16-201ENST00000372994 AGPAT5Q9NUQ2 364 aa16.73■□□□□ 0.27
C9orf16-201ENST00000372994 PIN4Q9Y237 131 aaKnown RBP16.73■□□□□ 0.27
C9orf16-201ENST00000372994 GRXCR2A6NFK2 248 aa16.72■□□□□ 0.27
C9orf16-201ENST00000372994 OR52Z1P0C646 297 aa16.72■□□□□ 0.27
C9orf16-201ENST00000372994 HOXA11P31270 313 aaPredicted RBP16.72■□□□□ 0.27
C9orf16-201ENST00000372994 IRS1P35568 1242 aa16.72■□□□□ 0.27
C9orf16-201ENST00000372994 TECP42680 631 aa16.72■□□□□ 0.27
C9orf16-201ENST00000372994 PLCB3Q01970 1234 aa16.72■□□□□ 0.27
C9orf16-201ENST00000372994 ADAM15Q13444 863 aa16.72■□□□□ 0.27
C9orf16-201ENST00000372994 GNL2Q13823 731 aaKnown RBP16.72■□□□□ 0.27
C9orf16-201ENST00000372994 PCBP1Q15365 356 aaKnown RBP eCLIP16.72■□□□□ 0.272e-9■■■■■ 61.5
C9orf16-201ENST00000372994 THNSL1Q8IYQ7 743 aa16.72■□□□□ 0.27
C9orf16-201ENST00000372994 C4orf32Q8N8J7 132 aa16.72■□□□□ 0.27
C9orf16-201ENST00000372994 RNF149Q8NC42 400 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms