RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 ARHGEF6Q15052 776 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 BCL2A1Q16548 175 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 WDR72Q3MJ13 1102 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 WDR45BQ5MNZ6 344 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 TMTC4Q5T4D3 741 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 IZUMO2Q6UXV1 221 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 TUBA1AQ71U36 451 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 GABPB2Q8TAK5 448 aaPredicted RBP11.42□□□□□ -0.58
TRERF1-203ENST00000372917 SIGLEC16A6NMB1 481 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 CBFA2T3O75081 653 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 CSE1LP55060 971 aaKnown RBP11.42□□□□□ -0.58
TRERF1-203ENST00000372917 PROSER3Q2NL68 480 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 ISLR2Q6UXK2 745 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 VPS36Q86VN1 386 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 KIAA1522Q9P206 1035 aaPredicted RBP11.42□□□□□ -0.58
TRERF1-203ENST00000372917 TTLL3Q9Y4R7 772 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 CEMIPQ8WUJ3 1361 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 H7C1D1 291 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 ADAM23O75077 832 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 IFI35P80217 286 aaPredicted RBP11.42□□□□□ -0.58
TRERF1-203ENST00000372917 BTKQ06187 659 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 NR1D2Q14995 579 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 HLFQ16534 295 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 USPL1Q5W0Q7 1092 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 ZNF280CQ8ND82 737 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 DGCR14Q96DF8 476 aaKnown RBP11.42□□□□□ -0.58
TRERF1-203ENST00000372917 CGREF1Q99674 301 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 DPH5Q9H2P9 285 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 ARMC7Q9H6L4 198 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 KCNK9Q9NPC2 374 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 CNGB3Q9NQW8 809 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 ABCC12Q96J65 1359 aa11.42□□□□□ -0.58
TRERF1-203ENST00000372917 PRAMEF22A3QJZ6 481 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 NUTM2BA6NNL0 878 aaPredicted RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 NUTM2EB1AL46 878 aaPredicted RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 TXNDC9O14530 226 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 BAG2O95816 211 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 CD44P16070 742 aaKnown RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 RALGDSQ12967 914 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 APPBP2Q92624 585 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 ISCUQ9H1K1 167 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 ATP6V0A2Q9Y487 856 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 CACNA1FO60840 1977 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 ABCC6O95255 1503 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 MON2Q7Z3U7 1717 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 GOLGA8TH3BQL2 631 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 ZBED1O96006 694 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 TFPTP0C1Z6 253 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 GOLGA8HP0CJ92 632 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 FDPSP14324 419 aaKnown RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 CCNB1P14635 433 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 C16orf72Q14CZ0 275 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 DEPDC1Q5TB30 811 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 VASH1Q7L8A9 365 aaPredicted RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 ZNF572Q7Z3I7 529 aaPredicted RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 KSR1Q8IVT5 923 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 THEMISQ8N1K5 641 aaPredicted RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 STARD8Q92502 1023 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 GFM2Q969S9 779 aaKnown RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 CYTH2Q99418 400 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 MYLK2Q9H1R3 596 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 PALMDQ9NP74 551 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 TUBGCP6Q96RT7 1819 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 DGKIO75912 1065 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 MSL3P1P0C860 447 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 HSPA1AP0DMV8 641 aaKnown RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 HSPA1BP0DMV9 641 aaKnown RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 EMP3P54852 163 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 ACAP1Q15027 740 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 RFWD3Q6PCD5 774 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 WDR59Q6PJI9 974 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 ZNF274Q96GC6 653 aaPredicted RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 KIAA1683Q9H0B3 1180 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 TIMMDC1Q9NPL8 285 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 CCPG1Q9ULG6 757 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 SMIM31A0A1B0GVY4 71 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 KCNJ18B7U540 433 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 PRLRP16471 622 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 MARK3P27448 753 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 KCNJ12Q14500 433 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 DAB2IPQ5VWQ8 1189 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 C2orf49Q9BVC5 232 aaPredicted RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 GLT8D2Q9H1C3 349 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 NEUROG2Q9H2A3 272 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 LRMDAQ9H2I8 198 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 SNX25Q9H3E2 840 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 GINM1Q9NU53 330 aa11.41□□□□□ -0.58
TRERF1-203ENST00000372917 C6orf203Q9P0P8 240 aaPredicted RBP11.41□□□□□ -0.58
TRERF1-203ENST00000372917 XRN1Q8IZH2 1706 aaKnown RBP11.4□□□□□ -0.58
TRERF1-203ENST00000372917 TBX10O75333 385 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 PRKACBP22694 351 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 KPNA1P52294 538 aaPredicted RBP11.4□□□□□ -0.58
TRERF1-203ENST00000372917 AP1B1Q10567 949 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 ANKDD1AQ495B1 522 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 ZNF804AQ7Z570 1209 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 KBTBD2Q8IY47 623 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 TRNAU1APQ9NX07 287 aaKnown RBP11.4□□□□□ -0.58
TRERF1-203ENST00000372917 OVOS2A0A0G2JMS6 1433 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms