RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 AGR3Q8TD06 166 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 NCLNQ969V3 563 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 PPP1R36Q96LQ0 422 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 SYNGAP1Q96PV0 1343 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 PLEKHG1Q9ULL1 1385 aa25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 CDK12Q9NYV4 1490 aaPredicted RBP25.56■■□□□ 1.68
RAPGEF1-203ENST00000372195 CLDN3O15551 220 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 NFX1Q12986 1120 aaKnown RBP25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 ARL13BQ3SXY8 428 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 SAMD9LQ8IVG5 1584 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 DCTN3O75935 186 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 SUPT20HL1Q3ZLR7 823 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 CYFIP1Q7L576 1253 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 ADGRF4Q8IZF3 695 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 DCAF4Q8WV16 495 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 RMDN3Q96TC7 470 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 DRC3Q9H069 523 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 TRPV6Q9H1D0 765 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 C1orf228Q6PIY5 440 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 STAG2Q8N3U4 1231 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 NOP53Q9NZM5 478 aaKnown RBP25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 CAPN11Q9UMQ6 739 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 ZRANB2O95218 330 aaKnown RBP eCLIP25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 ANO4Q32M45 955 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 CCDC188H7C350 402 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 CTIFO43310 598 aaKnown RBP25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 FGFR4P22455 802 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 VAMP7P51809 220 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 GPS1Q13098 491 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 LRRC23Q53EV4 343 aaPredicted RBP25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 BPIFA3Q9BQP9 254 aa25.55■■□□□ 1.68
RAPGEF1-203ENST00000372195 TRIM49P0CI25 452 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 TRIM49CP0CI26 452 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 TMEM179Q6ZVK1 233 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 DGKHQ86XP1 1220 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 NOC2LQ9Y3T9 749 aaKnown RBP25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 UBE4BO95155 1302 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 DENND3A2RUS2 1198 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 KNOP1Q1ED39 458 aaKnown RBP25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 RASSF3Q86WH2 238 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 ZNF579Q8NAF0 562 aaKnown RBP25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 TGS1Q96RS0 853 aaKnown RBP25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 HADHAP40939 763 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 MKRN4PQ13434 485 aaPredicted RBP25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 EXOC8Q8IYI6 725 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 PPM1NQ8N819 430 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 M0QYV0 167 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 MDH1BQ5I0G3 518 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 SLFN12LQ6IEE8 588 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 PPP1R2P3Q6NXS1 205 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 ARMCX2Q7L311 632 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 TEX2Q8IWB9 1127 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 ATXN7L3BQ96GX2 97 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 PALLDQ8WX93 1383 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 KRT10P13645 584 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 PPP2R2AP63151 447 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 GLE1Q53GS7 698 aaKnown RBP25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 LMBRD2Q68DH5 695 aaPredicted RBP25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 CATSPER4Q7RTX7 472 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 WDR24Q96S15 920 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 ADGRG1Q9Y653 693 aa25.54■■□□□ 1.68
RAPGEF1-203ENST00000372195 H3BRJ5 948 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 TRIM59Q8IWR1 403 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 ST13P4Q8IZP2 240 aaPredicted RBP25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 CENPKQ9BS16 269 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 DIS3Q9Y2L1 958 aaKnown RBP25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 GPC3P51654 580 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 C1orf146Q5VVC0 180 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 SZRD1Q7Z422 152 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 ZBED8Q8IZ13 594 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 CHGBP05060 677 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 NLRP14Q86W24 1093 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 RHPN2Q8IUC4 686 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 ATP8B3O60423 1300 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 AP1B1Q10567 949 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 NME3Q13232 169 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 ALCAMQ13740 583 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 ZNF568Q3ZCX4 644 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 XXYLT1Q8NBI6 393 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 CELF1Q92879 486 aaKnown RBP25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 TAF1BQ53T94 588 aaPredicted RBP25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 SWSAP1Q6NVH7 229 aa25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 SARS2Q9NP81 518 aaKnown RBP25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 APOBEC2Q9Y235 224 aaKnown RBP25.53■■□□□ 1.68
RAPGEF1-203ENST00000372195 PDIA2Q13087 525 aaKnown RBP25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 FRA10AC1Q70Z53 315 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 LBHD1Q9BQE6 289 aaPredicted RBP25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 ZNF335Q9H4Z2 1342 aaPredicted RBP25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 STK36Q9NRP7 1315 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 POU5F1BQ06416 359 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 RNF135Q8IUD6 432 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 IRX2Q9BZI1 471 aaPredicted RBP25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 MRFAP1Q9Y605 127 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 TSPOAP1O95153 1857 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 COA1Q9GZY4 146 aa25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 DCP1AQ9NPI6 582 aaPredicted RBP25.52■■□□□ 1.68
RAPGEF1-203ENST00000372195 CPDO75976 1380 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms