RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 H2AFVQ71UI9 128 aa18.54■□□□□ 0.56
VEGFA-205ENST00000372067 RPGRIP1Q96KN7 1286 aa18.54■□□□□ 0.56
VEGFA-205ENST00000372067 CD248Q9HCU0 757 aa18.54■□□□□ 0.56
VEGFA-205ENST00000372067 TMOD4Q9NZQ9 345 aa18.54■□□□□ 0.56
VEGFA-205ENST00000372067 PPFIA4O75335 1185 aa18.53■□□□□ 0.56
VEGFA-205ENST00000372067 PPP2R5CQ13362 524 aa18.53■□□□□ 0.56
VEGFA-205ENST00000372067 N4BP2L2Q92802 583 aaPredicted RBP18.53■□□□□ 0.56
VEGFA-205ENST00000372067 TUBBP07437 444 aa18.53■□□□□ 0.56
VEGFA-205ENST00000372067 IFI16Q16666 785 aaKnown RBP18.53■□□□□ 0.56
VEGFA-205ENST00000372067 SYTL5Q8TDW5 730 aaPredicted RBP18.53■□□□□ 0.56
VEGFA-205ENST00000372067 CRYGNQ8WXF5 182 aa18.53■□□□□ 0.56
VEGFA-205ENST00000372067 SALL4Q9UJQ4 1053 aa18.53■□□□□ 0.56
VEGFA-205ENST00000372067 COL11A2P13942 1736 aaPredicted RBP18.53■□□□□ 0.56
VEGFA-205ENST00000372067 SMCHD1A6NHR9 2005 aa18.53■□□□□ 0.56
VEGFA-205ENST00000372067 LRRC1Q9BTT6 524 aa18.53■□□□□ 0.56
VEGFA-205ENST00000372067 CENPHQ9H3R5 247 aa18.53■□□□□ 0.56
VEGFA-205ENST00000372067 AGPAT3Q9NRZ7 376 aa18.53■□□□□ 0.56
VEGFA-205ENST00000372067 TTLL12Q14166 644 aaPredicted RBP18.52■□□□□ 0.56
VEGFA-205ENST00000372067 DRAP1Q14919 205 aaPredicted RBP18.52■□□□□ 0.56
VEGFA-205ENST00000372067 ZNF720Q7Z2F6 126 aa18.52■□□□□ 0.56
VEGFA-205ENST00000372067 PEX26Q7Z412 305 aa18.52■□□□□ 0.56
VEGFA-205ENST00000372067 DAAM2Q86T65 1068 aa18.52■□□□□ 0.56
VEGFA-205ENST00000372067 SLC35C1Q96A29 364 aa18.52■□□□□ 0.56
VEGFA-205ENST00000372067 KIFC3Q9BVG8 833 aa18.52■□□□□ 0.56
VEGFA-205ENST00000372067 HNRNPH3P31942 346 aaKnown RBP18.52■□□□□ 0.56
VEGFA-205ENST00000372067 SMTNP53814 917 aa18.52■□□□□ 0.56
VEGFA-205ENST00000372067 BEND6Q5SZJ8 279 aaPredicted RBP18.52■□□□□ 0.56
VEGFA-205ENST00000372067 LPAR1Q92633 364 aa18.52■□□□□ 0.56
VEGFA-205ENST00000372067 CEP170P1Q96L14 293 aa18.52■□□□□ 0.56
VEGFA-205ENST00000372067 RIT2Q99578 217 aa18.52■□□□□ 0.56
VEGFA-205ENST00000372067 TGFB1I1O43294 461 aa18.52■□□□□ 0.55
VEGFA-205ENST00000372067 CAND2O75155 1236 aa18.52■□□□□ 0.55
VEGFA-205ENST00000372067 YWHABP31946 246 aaKnown RBP18.52■□□□□ 0.55
VEGFA-205ENST00000372067 HOXD13P35453 343 aa18.52■□□□□ 0.55
VEGFA-205ENST00000372067 R3HDM1Q15032 1099 aaKnown RBP18.52■□□□□ 0.55
VEGFA-205ENST00000372067 ZNF571Q7Z3V5 609 aaPredicted RBP18.52■□□□□ 0.55
VEGFA-205ENST00000372067 GLYCTKQ8IVS8 523 aa18.52■□□□□ 0.55
VEGFA-205ENST00000372067 MSANTD4Q8NCY6 345 aa18.52■□□□□ 0.55
VEGFA-205ENST00000372067 SPATA4Q8NEY3 305 aa18.52■□□□□ 0.55
VEGFA-205ENST00000372067 GIMAP7Q8NHV1 300 aa18.52■□□□□ 0.55
VEGFA-205ENST00000372067 ZNF483Q8TF39 744 aaPredicted RBP18.52■□□□□ 0.55
VEGFA-205ENST00000372067 ACCSQ96QU6 501 aa18.52■□□□□ 0.55
VEGFA-205ENST00000372067 AS3MTQ9HBK9 375 aa18.52■□□□□ 0.55
VEGFA-205ENST00000372067 UBE2TQ9NPD8 197 aaPredicted RBP18.52■□□□□ 0.55
VEGFA-205ENST00000372067 HARSP12081 509 aaKnown RBP18.51■□□□□ 0.55
VEGFA-205ENST00000372067 FMO5P49326 533 aa18.51■□□□□ 0.55
VEGFA-205ENST00000372067 FKBP1CQ5VVH2 108 aa18.51■□□□□ 0.55
VEGFA-205ENST00000372067 HGSNATQ68CP4 663 aa18.51■□□□□ 0.55
VEGFA-205ENST00000372067 ARHGAP27Q6ZUM4 889 aa18.51■□□□□ 0.55
VEGFA-205ENST00000372067 ADAT2Q7Z6V5 191 aaKnown RBP18.51■□□□□ 0.55
VEGFA-205ENST00000372067 KRT12Q99456 494 aa18.51■□□□□ 0.55
VEGFA-205ENST00000372067 PPM1KQ8N3J5 372 aa18.51■□□□□ 0.55
VEGFA-205ENST00000372067 CTNNBL1Q8WYA6 563 aaPredicted RBP18.51■□□□□ 0.55
VEGFA-205ENST00000372067 SAAL1Q96ER3 474 aa18.51■□□□□ 0.55
VEGFA-205ENST00000372067 OLFML3Q9NRN5 406 aa18.51■□□□□ 0.55
VEGFA-205ENST00000372067 SEL1LQ9UBV2 794 aa18.51■□□□□ 0.55
VEGFA-205ENST00000372067 FRMD3A2A2Y4 597 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 DLATP10515 647 aaKnown RBP18.5■□□□□ 0.55
VEGFA-205ENST00000372067 KCNA3P22001 575 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 HAUS6Q7Z4H7 955 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 THOC1Q96FV9 657 aaKnown RBP18.5■□□□□ 0.55
VEGFA-205ENST00000372067 GANQ9H2C0 597 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 TBC1D12O60347 775 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 CTNND1O60716 968 aaKnown RBP18.5■□□□□ 0.55
VEGFA-205ENST00000372067 SOX10P56693 466 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 PPARDQ03181 441 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 NAA35Q5VZE5 725 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 PROCA1Q8NCQ7 364 aaPredicted RBP18.5■□□□□ 0.55
VEGFA-205ENST00000372067 INTS2Q9H0H0 1204 aaKnown RBP18.5■□□□□ 0.55
VEGFA-205ENST00000372067 GABBR1Q9UBS5 961 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 SEPT9Q9UHD8 586 aaPredicted RBP18.5■□□□□ 0.55
VEGFA-205ENST00000372067 BZW2Q9Y6E2 419 aaKnown RBP18.5■□□□□ 0.55
VEGFA-205ENST00000372067 LRRC37AA6NMS7 1700 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 EMSYQ7Z589 1322 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 ESYT3A0FGR9 886 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 RTN2O75298 545 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 FERP16591 822 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 KCTD19Q17RG1 926 aaPredicted RBP18.5■□□□□ 0.55
VEGFA-205ENST00000372067 SLC16A10Q8TF71 515 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 SELENOOQ9BVL4 669 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 A1CFQ9NQ94 594 aaKnown RBP18.5■□□□□ 0.55
VEGFA-205ENST00000372067 ODF2LQ9ULJ1 636 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 PPP1R9AQ9ULJ8 1098 aa18.5■□□□□ 0.55
VEGFA-205ENST00000372067 SLC16A3O15427 465 aaKnown RBP18.49■□□□□ 0.55
VEGFA-205ENST00000372067 CBWD1Q9BRT8 395 aa18.49■□□□□ 0.55
VEGFA-205ENST00000372067 SYNPO2Q9UMS6 1093 aa18.49■□□□□ 0.55
VEGFA-205ENST00000372067 TTC36A6NLP5 189 aa18.49■□□□□ 0.55
VEGFA-205ENST00000372067 EVI5O60447 810 aa18.49■□□□□ 0.55
VEGFA-205ENST00000372067 ATP9AO75110 1047 aa18.49■□□□□ 0.55
VEGFA-205ENST00000372067 PTGER2P43116 358 aa18.49■□□□□ 0.55
VEGFA-205ENST00000372067 GUCY2FP51841 1108 aa18.49■□□□□ 0.55
VEGFA-205ENST00000372067 GUCY2DQ02846 1103 aa18.49■□□□□ 0.55
VEGFA-205ENST00000372067 ITGB3BPQ13352 177 aaPredicted RBP18.49■□□□□ 0.55
VEGFA-205ENST00000372067 KIRREL3Q8IZU9 778 aa18.49■□□□□ 0.55
VEGFA-205ENST00000372067 AGO4Q9HCK5 861 aaKnown RBP18.49■□□□□ 0.55
VEGFA-205ENST00000372067 TBC1D22BQ9NU19 505 aa18.49■□□□□ 0.55
VEGFA-205ENST00000372067 TSKSQ9UJT2 592 aa18.49■□□□□ 0.55
VEGFA-205ENST00000372067 WDR64B1ANS9 1081 aa18.49■□□□□ 0.55
VEGFA-205ENST00000372067 EIF3DO15371 548 aaKnown RBP eCLIP18.49■□□□□ 0.55
VEGFA-205ENST00000372067 SKAP2O75563 359 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms