RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 WNK4Q96J92 1243 aa22.4■■□□□ 1.18
VEGFA-204ENST00000372064 TMEM206Q9H813 350 aa22.4■■□□□ 1.18
VEGFA-204ENST00000372064 HACL1Q9UJ83 578 aa22.4■■□□□ 1.18
VEGFA-204ENST00000372064 CTDP1Q9Y5B0 961 aaPredicted RBP22.4■■□□□ 1.18
VEGFA-204ENST00000372064 TISP43B9A030 160 aa22.4■■□□□ 1.18
VEGFA-204ENST00000372064 ATP9AO75110 1047 aa22.4■■□□□ 1.18
VEGFA-204ENST00000372064 GMPSP49915 693 aaPredicted RBP22.4■■□□□ 1.18
VEGFA-204ENST00000372064 FMNL3Q8IVF7 1028 aa22.4■■□□□ 1.18
VEGFA-204ENST00000372064 C12orf56Q8IXR9 622 aa22.4■■□□□ 1.18
VEGFA-204ENST00000372064 LNX1Q8TBB1 728 aaPredicted RBP22.4■■□□□ 1.18
VEGFA-204ENST00000372064 CAVIN3Q969G5 261 aa22.4■■□□□ 1.18
VEGFA-204ENST00000372064 TBC1D22BQ9NU19 505 aa22.4■■□□□ 1.18
VEGFA-204ENST00000372064 APEX2Q9UBZ4 518 aa22.4■■□□□ 1.18
VEGFA-204ENST00000372064 NPEPPSP55786 919 aa22.39■■□□□ 1.18
VEGFA-204ENST00000372064 MYL7Q01449 175 aa22.39■■□□□ 1.18
VEGFA-204ENST00000372064 DRAP1Q14919 205 aaPredicted RBP22.39■■□□□ 1.18
VEGFA-204ENST00000372064 UGCGQ16739 394 aa22.39■■□□□ 1.18
VEGFA-204ENST00000372064 NSMFQ6X4W1 530 aa22.39■■□□□ 1.18
VEGFA-204ENST00000372064 USP38Q8NB14 1042 aa22.39■■□□□ 1.18
VEGFA-204ENST00000372064 TRERF1Q96PN7 1200 aa22.39■■□□□ 1.18
VEGFA-204ENST00000372064 PPP1R1BQ9UD71 204 aaPredicted RBP22.39■■□□□ 1.18
VEGFA-204ENST00000372064 GGCXP38435 758 aa22.39■■□□□ 1.17
VEGFA-204ENST00000372064 SND1Q7KZF4 910 aaKnown RBP eCLIP22.39■■□□□ 1.174e-9■■□□□ 11.5
VEGFA-204ENST00000372064 LMO3Q8TAP4 145 aa22.39■■□□□ 1.17
VEGFA-204ENST00000372064 PBKQ96KB5 322 aa22.39■■□□□ 1.17
VEGFA-204ENST00000372064 RMDN3Q96TC7 470 aa22.39■■□□□ 1.17
VEGFA-204ENST00000372064 PHACTR2O75167 634 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 PLS3P13797 630 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 RPS12P25398 132 aaKnown RBP22.38■■□□□ 1.17
VEGFA-204ENST00000372064 LMAN1P49257 510 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 TAF4BQ92750 862 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 ATG4CQ96DT6 458 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 PDCD2LQ9BRP1 358 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 PCIF1Q9H4Z3 704 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 ZBED4O75132 1171 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 LMNB1P20700 586 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 RFX1P22670 979 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 YWHABP31946 246 aaKnown RBP22.38■■□□□ 1.17
VEGFA-204ENST00000372064 NOP2P46087 812 aaKnown RBP22.38■■□□□ 1.17
VEGFA-204ENST00000372064 RNF207Q6ZRF8 634 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 GOLPH3Q9H4A6 298 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 ST6GALNAC4Q9H4F1 302 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 GJA3Q9Y6H8 435 aa22.38■■□□□ 1.17
VEGFA-204ENST00000372064 GLI1P08151 1106 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 NNTQ13423 1086 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 TAF3Q5VWG9 929 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 IFT20Q8IY31 132 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 U2AF1L4Q8WU68 220 aaKnown RBP22.37■■□□□ 1.17
VEGFA-204ENST00000372064 TIPINQ9BVW5 301 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 STXBP5LQ9Y2K9 1186 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 RIPK3Q9Y572 518 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 ACTRT1Q8TDG2 376 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 LMBR1Q8WVP7 490 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 PKNOX2Q96KN3 472 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 ACCSQ96QU6 501 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 FAM204AQ9H8W3 233 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 PXMP2Q9NR77 195 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 CNOT7Q9UIV1 285 aaKnown RBP22.37■■□□□ 1.17
VEGFA-204ENST00000372064 PNMA2Q9UL42 364 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 GOLGA6BA6NDN3 693 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 VWA5AO00534 786 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 KCNK3O14649 394 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 INTS8Q75QN2 995 aaKnown RBP22.37■■□□□ 1.17
VEGFA-204ENST00000372064 NCANO14594 1321 aa22.37■■□□□ 1.17
VEGFA-204ENST00000372064 C4orf19Q8IY42 314 aa22.36■■□□□ 1.17
VEGFA-204ENST00000372064 GPRC5CQ9NQ84 441 aa22.36■■□□□ 1.17
VEGFA-204ENST00000372064 FZD1Q9UP38 647 aa22.36■■□□□ 1.17
VEGFA-204ENST00000372064 TESPA1A2RU30 521 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-204ENST00000372064 BACH1O14867 736 aa22.36■■□□□ 1.17
VEGFA-204ENST00000372064 CCNE2O96020 404 aa22.36■■□□□ 1.17
VEGFA-204ENST00000372064 CCDC172P0C7W6 258 aa22.36■■□□□ 1.17
VEGFA-204ENST00000372064 GALCP54803 685 aa22.36■■□□□ 1.17
VEGFA-204ENST00000372064 DLG4P78352 724 aa22.36■■□□□ 1.17
VEGFA-204ENST00000372064 GTF2BQ00403 316 aa22.36■■□□□ 1.17
VEGFA-204ENST00000372064 ARHGEF16Q5VV41 709 aa22.36■■□□□ 1.17
VEGFA-204ENST00000372064 PHLDB3Q6NSJ2 640 aa22.36■■□□□ 1.17
VEGFA-204ENST00000372064 ZKSCAN4Q969J2 545 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-204ENST00000372064 CCDC43Q96MW1 224 aaKnown RBP22.36■■□□□ 1.17
VEGFA-204ENST00000372064 CBWD1Q9BRT8 395 aa22.36■■□□□ 1.17
VEGFA-204ENST00000372064 SUCLA2Q9P2R7 463 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-204ENST00000372064 MCCD1P59942 119 aaPredicted RBP22.35■■□□□ 1.17
VEGFA-204ENST00000372064 KIF22Q14807 665 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 PRAMEF18Q5VWM3 479 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 GLYCTKQ8IVS8 523 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 SYCE1Q8N0S2 351 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 RIN2Q8WYP3 895 aaPredicted RBP22.35■■□□□ 1.17
VEGFA-204ENST00000372064 KRT12Q99456 494 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 PARP14Q460N5 1801 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 MAPK13O15264 365 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 P4HA2O15460 535 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 HEXIM1O94992 359 aaKnown RBP22.35■■□□□ 1.17
VEGFA-204ENST00000372064 KRT13P13646 458 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 RNASE9P60153 205 aaKnown RBP22.35■■□□□ 1.17
VEGFA-204ENST00000372064 SNRPFP62306 86 aaKnown RBP22.35■■□□□ 1.17
VEGFA-204ENST00000372064 BAATQ14032 418 aaPredicted RBP22.35■■□□□ 1.17
VEGFA-204ENST00000372064 PTPROQ16827 1216 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 SCFD2Q8WU76 684 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 RNF146Q9NTX7 359 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 CALCOCO1Q9P1Z2 691 aa22.35■■□□□ 1.17
VEGFA-204ENST00000372064 BCS1LQ9Y276 419 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms