RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 GPR32O75388 356 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 MMP1P03956 469 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 PSAPP07602 524 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 STAG3L1P0CL83 205 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 TNNT1P13805 278 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 CYP3A7P24462 503 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 CTNNB1P35222 781 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 LTBRP36941 435 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 SARSP49591 514 aaKnown RBP16.64■□□□□ 0.25
LMO4-201ENST00000370542 ZNF75DP51815 510 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 FAM189BP81408 668 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 ZP2Q05996 745 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 NPY5RQ15761 445 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 PRR16Q569H4 304 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 SARM1Q6SZW1 724 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 B3GNT9Q6UX72 402 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 ERMP1Q7Z2K6 904 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 CHAMP1Q96JM3 812 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 RIT2Q99578 217 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 PRRX2Q99811 253 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 ARID3AQ99856 593 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 SLC26A6Q9BXS9 759 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 NCOA5Q9HCD5 579 aaKnown RBP16.64■□□□□ 0.25
LMO4-201ENST00000370542 RGS18Q9NS28 235 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 VPS54Q9P1Q0 977 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 PLAGL2Q9UPG8 496 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 NOC2LQ9Y3T9 749 aaKnown RBP16.64■□□□□ 0.25
LMO4-201ENST00000370542 CYP46A1Q9Y6A2 500 aa16.64■□□□□ 0.25
LMO4-201ENST00000370542 MRPL42Q9Y6G3 142 aaKnown RBP16.64■□□□□ 0.25
LMO4-201ENST00000370542 GOLGA6L4A6NEF3 574 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 MSH4O15457 936 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 U2AF2P26368 475 aaKnown RBP eCLIP16.63■□□□□ 0.256e-6■□□□□ 8.6
LMO4-201ENST00000370542 GJB2P29033 226 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 CRYBB1P53674 252 aaPredicted RBP16.63■□□□□ 0.25
LMO4-201ENST00000370542 CCT2P78371 535 aaKnown RBP16.63■□□□□ 0.25
LMO4-201ENST00000370542 PLCB2Q00722 1185 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 ODR4Q5SWX8 454 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 BMP8AQ7Z5Y6 402 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 DRC7Q8IY82 874 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 SLC5A5Q92911 643 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 MBOAT7Q96N66 472 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 TNMDQ9H2S6 317 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 PDRG1Q9NUG6 133 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 PRKAG3Q9UGI9 489 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 CEP131Q9UPN4 1083 aa16.63■□□□□ 0.25
LMO4-201ENST00000370542 WDR64B1ANS9 1081 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 C9IYK1 514 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 MAGEB2O15479 319 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 ZNF862O60290 1169 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 RPS6KA5O75582 802 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 DSC3Q14574 896 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 Q4G0T1 1027 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 DAGLBQ8NCG7 672 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 SPPL3Q8TCT6 385 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 FAM167AQ96KS9 214 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 DISC1Q9NRI5 854 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 C1orf112Q9NSG2 853 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 CALCOCO1Q9P1Z2 691 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 GABBR1Q9UBS5 961 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 PCDHA4Q9UN74 947 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 ST3GAL5Q9UNP4 418 aa16.62■□□□□ 0.25
LMO4-201ENST00000370542 KIAA1671Q9BY89 1806 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 FNDC1Q4ZHG4 1894 aaPredicted RBP16.61■□□□□ 0.25
LMO4-201ENST00000370542 GPR182O15218 404 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 PPFIA3O75145 1194 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 PSMD10O75832 226 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 DEXIO95424 95 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 HYAL1Q12794 435 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 TMEM266Q2M3C6 531 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 GALNT17Q6IS24 598 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 MOXD1Q6UVY6 613 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 SLC24A5Q71RS6 500 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 FAM228AQ86W67 206 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 RDM1Q8NG50 284 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 MRFAP1L1Q96HT8 127 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 CLSTN2Q9H4D0 955 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 ELAC1Q9H777 363 aaKnown RBP16.61■□□□□ 0.25
LMO4-201ENST00000370542 ALG13Q9NP73 1137 aaKnown RBP16.61■□□□□ 0.25
LMO4-201ENST00000370542 MYO15AQ9UKN7 3530 aa16.61■□□□□ 0.25
LMO4-201ENST00000370542 ITGB1P05556 798 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 DNAJB1P25685 340 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 SFNP31947 248 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 NLRP5P59047 1200 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 SLC20A2Q08357 652 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 SSRP1Q08945 709 aaKnown RBP16.6■□□□□ 0.25
LMO4-201ENST00000370542 NFX1Q12986 1120 aaKnown RBP16.6■□□□□ 0.25
LMO4-201ENST00000370542 TARBP2Q15633 366 aaKnown RBP16.6■□□□□ 0.25
LMO4-201ENST00000370542 TPD52L1Q16890 204 aaPredicted RBP16.6■□□□□ 0.25
LMO4-201ENST00000370542 HERC4Q5GLZ8 1057 aaPredicted RBP16.6■□□□□ 0.25
LMO4-201ENST00000370542 CEP135Q66GS9 1140 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 CCDC186Q7Z3E2 898 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 TRIM22Q8IYM9 498 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 KIF18AQ8NI77 898 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 TBCKQ8TEA7 893 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 CEP89Q96ST8 783 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 ADAM2Q99965 735 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 TRIM5Q9C035 493 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 ADAMTS10Q9H324 1103 aa16.6■□□□□ 0.25
LMO4-201ENST00000370542 SPDYE4A6NLX3 237 aa16.59■□□□□ 0.25
LMO4-201ENST00000370542 H3BQ06 376 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms