RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 ST3GAL5Q9UNP4 418 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.98□□□□□ -0.49
TUBE1-201ENST00000368657 MSRB2Q9Y3D2 182 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 PCDHA2Q9Y5H9 948 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 LAMA5O15230 3695 aa11.98□□□□□ -0.49
TUBE1-201ENST00000368657 GPAA1O43292 621 aa11.97□□□□□ -0.49
TUBE1-201ENST00000368657 RANBP6O60518 1105 aaKnown RBP11.97□□□□□ -0.49
TUBE1-201ENST00000368657 SNHG28P0DPA3 235 aa11.97□□□□□ -0.49
TUBE1-201ENST00000368657 CEACAM1P13688 526 aa11.97□□□□□ -0.49
TUBE1-201ENST00000368657 TARSP26639 723 aaKnown RBP11.97□□□□□ -0.49
TUBE1-201ENST00000368657 METAP2P50579 478 aaKnown RBP eCLIP11.97□□□□□ -0.49
TUBE1-201ENST00000368657 BCAR1P56945 870 aa11.97□□□□□ -0.49
TUBE1-201ENST00000368657 HNRNPUQ00839 825 aaKnown RBP eCLIP11.97□□□□□ -0.49
TUBE1-201ENST00000368657 PROSER1Q86XN7 944 aa11.97□□□□□ -0.49
TUBE1-201ENST00000368657 FAM160A2Q8N612 972 aaPredicted RBP11.97□□□□□ -0.49
TUBE1-201ENST00000368657 GIMAP8Q8ND71 665 aaPredicted RBP11.97□□□□□ -0.49
TUBE1-201ENST00000368657 SMG7Q92540 1137 aaKnown RBP11.97□□□□□ -0.49
TUBE1-201ENST00000368657 APPBP2Q92624 585 aa11.97□□□□□ -0.49
TUBE1-201ENST00000368657 PHKBQ93100 1093 aa11.97□□□□□ -0.49
TUBE1-201ENST00000368657 SENP7Q9BQF6 1050 aa11.97□□□□□ -0.49
TUBE1-201ENST00000368657 RPP25Q9BUL9 199 aaKnown RBP11.97□□□□□ -0.49
TUBE1-201ENST00000368657 NOC2LQ9Y3T9 749 aaKnown RBP11.97□□□□□ -0.49
TUBE1-201ENST00000368657 AKAP13Q12802 2813 aa11.97□□□□□ -0.49
TUBE1-201ENST00000368657 MYH7P12883 1935 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 SMIM35A0A1B0GVV1 85 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 NT5C1B-RDH14C9J2C7 533 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 GIPC1O14908 333 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 PAPLNO95428 1278 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 TOP3BO95985 862 aaKnown RBP11.96□□□□□ -0.49
TUBE1-201ENST00000368657 TRIM27P14373 513 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.49
TUBE1-201ENST00000368657 IGBP1P78318 339 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 CDC37Q16543 378 aaPredicted RBP11.96□□□□□ -0.49
TUBE1-201ENST00000368657 COL28A1Q2UY09 1125 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 RNF43Q68DV7 783 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 MTSS1LQ765P7 747 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 TTC14Q96N46 770 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 MRPL9Q9BYD2 267 aaKnown RBP11.96□□□□□ -0.49
TUBE1-201ENST00000368657 NAPBQ9H115 298 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 ARRDC1-AS1Q9H2J1 176 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 CHRDQ9H2X0 955 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 SMARCAD1Q9H4L7 1026 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 PIDD1Q9HB75 910 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 TCP11L1Q9NUJ3 509 aa11.96□□□□□ -0.49
TUBE1-201ENST00000368657 DOCK8Q8NF50 2099 aa11.96□□□□□ -0.5
TUBE1-201ENST00000368657 GREB1Q4ZG55 1949 aa11.96□□□□□ -0.5
TUBE1-201ENST00000368657 AXIN1O15169 862 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 INPPL1O15357 1258 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 FIBPO43427 364 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 PPP1R37O75864 691 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 CNPP09543 421 aaKnown RBP11.95□□□□□ -0.5
TUBE1-201ENST00000368657 INSRRP14616 1297 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 TCF7P36402 384 aaPredicted RBP11.95□□□□□ -0.5
TUBE1-201ENST00000368657 CXCL12P48061 93 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 DAB2IPQ5VWQ8 1189 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 CEP68Q76N32 757 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 LONP2Q86WA8 852 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 HDAC7Q8WUI4 952 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 SEPT1Q8WYJ6 367 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 RSPH1Q8WYR4 309 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 FGF14Q92915 247 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 MARVELD3Q96A59 401 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 KIF1BPQ96EK5 621 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 IGSF21Q96ID5 467 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 UBA5Q9GZZ9 404 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 MAN1C1Q9NR34 630 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 RNF19AQ9NV58 838 aa11.95□□□□□ -0.5
TUBE1-201ENST00000368657 LILRB3O75022 631 aa11.94□□□□□ -0.5
TUBE1-201ENST00000368657 ZFYP08048 801 aaPredicted RBP11.94□□□□□ -0.5
TUBE1-201ENST00000368657 MARK3P27448 753 aa11.94□□□□□ -0.5
TUBE1-201ENST00000368657 TROAPQ12815 778 aa11.94□□□□□ -0.5
TUBE1-201ENST00000368657 CCDC6Q16204 474 aa11.94□□□□□ -0.5
TUBE1-201ENST00000368657 SH3PXD2AQ5TCZ1 1133 aa11.94□□□□□ -0.5
TUBE1-201ENST00000368657 PARM1Q6UWI2 310 aa11.94□□□□□ -0.5
TUBE1-201ENST00000368657 TPRG1Q6ZUI0 275 aa11.94□□□□□ -0.5
TUBE1-201ENST00000368657 INPP4AQ96PE3 977 aaPredicted RBP11.94□□□□□ -0.5
TUBE1-201ENST00000368657 HNRNPABQ99729 332 aaKnown RBP11.94□□□□□ -0.5
TUBE1-201ENST00000368657 LAMA4Q16363 1823 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 CHURC1-FNTBB4DL54 471 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 TK2O00142 265 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 MAN2B1O00754 1011 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 RNF113AO15541 343 aaKnown RBP11.93□□□□□ -0.5
TUBE1-201ENST00000368657 ORC4O43929 436 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 C1RP00736 705 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 CAPNS1P04632 268 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 CSRP1P21291 193 aaKnown RBP11.93□□□□□ -0.5
TUBE1-201ENST00000368657 FNTBP49356 437 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 SP4Q02446 784 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 DSC3Q14574 896 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 LARP1BQ659C4 914 aaKnown RBP11.93□□□□□ -0.5
TUBE1-201ENST00000368657 GET4Q7L5D6 327 aaPredicted RBP11.93□□□□□ -0.5
TUBE1-201ENST00000368657 TRMT2AQ8IZ69 625 aaKnown RBP11.93□□□□□ -0.5
TUBE1-201ENST00000368657 ADGRF4Q8IZF3 695 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 IL31RAQ8NI17 732 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 C1orf115Q9H7X2 142 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 MRPL17Q9NRX2 175 aaKnown RBP11.93□□□□□ -0.5
TUBE1-201ENST00000368657 GINS2Q9Y248 185 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 SSX2IPQ9Y2D8 614 aa11.93□□□□□ -0.5
TUBE1-201ENST00000368657 GOLGA8HP0CJ92 632 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 ZSCAN20P17040 1043 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms