RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 EPHB6O15197 1021 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 ARIH2O95376 493 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 HOXA7P31268 230 aaPredicted RBP11.63□□□□□ -0.55
TPM3-212ENST00000368533 PEX3P56589 373 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 ACTR2P61160 394 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 ERVK-9P63128 1117 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 KRT83P78385 493 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 KCTD2Q14681 263 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 CASP8Q14790 479 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 SWT1Q5T5J6 900 aaKnown RBP11.63□□□□□ -0.55
TPM3-212ENST00000368533 B3GNT9Q6UX72 402 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 ANO5Q75V66 913 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 FAM114A1Q8IWE2 563 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 DAW1Q8N136 415 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 NOA1Q8NC60 698 aaKnown RBP11.63□□□□□ -0.55
TPM3-212ENST00000368533 ZSWIM2Q8NEG5 633 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 FAM84AQ96KN4 292 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 CEP170P1Q96L14 293 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 INPP4AQ96PE3 977 aaPredicted RBP11.63□□□□□ -0.55
TPM3-212ENST00000368533 MMP19Q99542 508 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 PARVGQ9HBI0 331 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 SLC24A3Q9HC58 644 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 TBC1D22BQ9NU19 505 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 KCNH4Q9UQ05 1017 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 SLC16A4O15374 487 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 KRT86O43790 486 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 OSBPP22059 807 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 LRRC55Q6ZSA7 311 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 C2orf69Q8N8R5 385 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 ELMO3Q96BJ8 720 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 CCDC42Q96M95 316 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 HAUS4Q9H6D7 363 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 SLC9A2Q9UBY0 812 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 CAPN11Q9UMQ6 739 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 L1RE1Q9UN81 338 aa11.63□□□□□ -0.55
TPM3-212ENST00000368533 BCRP11274 1271 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 SPA17Q15506 151 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 WHAMMP3Q1A5X7 153 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 MIIPQ5JXC2 388 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 SYCP3Q8IZU3 236 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 PTPN18Q99952 460 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 CPA4Q9UI42 421 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 REXO2Q9Y3B8 237 aaKnown RBP11.62□□□□□ -0.55
TPM3-212ENST00000368533 PCDHA10Q9Y5I2 948 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 COL4A3BPQ9Y5P4 624 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 A0A087WUV0 522 aaPredicted RBP11.62□□□□□ -0.55
TPM3-212ENST00000368533 CCDC189A1A4V9 331 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 RNF40O75150 1001 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 PPFIA4O75335 1185 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 UBA1P22314 1058 aaKnown RBP11.62□□□□□ -0.55
TPM3-212ENST00000368533 TUBB2AQ13885 445 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 GNPTABQ3T906 1256 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 FASTKD5Q7L8L6 764 aaKnown RBP11.62□□□□□ -0.55
TPM3-212ENST00000368533 CHST13Q8NET6 341 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 PPP1R16BQ96T49 567 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 NHEJ1Q9H9Q4 299 aaPredicted RBP11.62□□□□□ -0.55
TPM3-212ENST00000368533 NLRC4Q9NPP4 1024 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 ATP2A1O14983 1001 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 ZMYND10O75800 440 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 GGPS1O95749 300 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 ATP1A1P05023 1023 aaKnown RBP11.62□□□□□ -0.55
TPM3-212ENST00000368533 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
TPM3-212ENST00000368533 PRKCEQ02156 737 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 ARID5AQ03989 594 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 MS4A4AQ96JQ5 239 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 CEP89Q96ST8 783 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 KCTD10Q9H3F6 313 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 SAR1BQ9Y6B6 198 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 DUSP10Q9Y6W6 482 aa11.62□□□□□ -0.55
TPM3-212ENST00000368533 A0A1W2PQC6 194 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 WDR59Q6PJI9 974 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 RPAINQ86UA6 219 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 KIRREL3Q8IZU9 778 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 ZNF507Q8TCN5 953 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 TMEM143Q96AN5 459 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 CD248Q9HCU0 757 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 MYO1AQ9UBC5 1043 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 MYH11P35749 1972 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 FRMD3A2A2Y4 597 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 GOLGA8IPA6NC78 632 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 GOLGA8JA6NMD2 632 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 MYO1FO00160 1098 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 EIF3JO75822 258 aaKnown RBP11.61□□□□□ -0.55
TPM3-212ENST00000368533 ZNF157P51786 506 aaPredicted RBP11.61□□□□□ -0.55
TPM3-212ENST00000368533 PSMC5P62195 406 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 FKBP3Q00688 224 aaKnown RBP11.61□□□□□ -0.55
TPM3-212ENST00000368533 PPARDQ03181 441 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 KIF5AQ12840 1032 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 MAPK7Q13164 816 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 PSMD2Q13200 908 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 KNOP1Q1ED39 458 aaKnown RBP11.61□□□□□ -0.55
TPM3-212ENST00000368533 HSDL1Q3SXM5 330 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 PSMB7Q99436 277 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 LACRTQ9GZZ8 138 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 NDST4Q9H3R1 872 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 MLXIPQ9HAP2 919 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 FRMPD4Q14CM0 1322 aa11.61□□□□□ -0.55
TPM3-212ENST00000368533 LCTP09848 1927 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 AKR1B10O60218 316 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms