RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 STK3Q13188 491 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 INF2Q27J81 1249 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 PLPP4Q5VZY2 271 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 ANO5Q75V66 913 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 KRT25Q7Z3Z0 450 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 SLC39A11Q8N1S5 342 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 RNF169Q8NCN4 708 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 SH2D3AQ9BRG2 576 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 PHF20Q9BVI0 1012 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 S1PR5Q9H228 398 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 KCNH6Q9H252 994 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 PDRG1Q9NUG6 133 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 MUC6Q6W4X9 2439 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 TECTAO75443 2155 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 ZNF318Q5VUA4 2279 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 A0A087WZ62 844 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 DDX11L8A8MPP1 907 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 HIDE1A8MVS5 230 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 EML1O00423 815 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 SLC37A4O43826 429 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 CSDE1O75534 798 aaKnown RBP17.99■□□□□ 0.47
CKS1B-202ENST00000368436 SRGAP2BP0DMP2 458 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 PBX3P40426 434 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 PSMC5P62195 406 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 PPP2R5CQ13362 524 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 HFE2Q6ZVN8 426 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 ZNF410Q86VK4 478 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 HELQQ8TDG4 1101 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 RSPH1Q8WYR4 309 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 FDXACB1Q9BRP7 624 aaPredicted RBP17.99■□□□□ 0.47
CKS1B-202ENST00000368436 KCNMB3Q9NPA1 279 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 ENTPD7Q9NQZ7 604 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 SUCLA2Q9P2R7 463 aaPredicted RBP17.99■□□□□ 0.47
CKS1B-202ENST00000368436 KCNJ14Q9UNX9 436 aa17.99■□□□□ 0.47
CKS1B-202ENST00000368436 PHKA2P46019 1235 aa17.98■□□□□ 0.47
CKS1B-202ENST00000368436 SCRN1Q12765 414 aa17.98■□□□□ 0.47
CKS1B-202ENST00000368436 PPP4R3AQ6IN85 833 aa17.98■□□□□ 0.47
CKS1B-202ENST00000368436 ANKRD54Q6NXT1 300 aa17.98■□□□□ 0.47
CKS1B-202ENST00000368436 SYCE2Q6PIF2 218 aa17.98■□□□□ 0.47
CKS1B-202ENST00000368436 BMP8AQ7Z5Y6 402 aa17.98■□□□□ 0.47
CKS1B-202ENST00000368436 FAM20AQ96MK3 541 aa17.98■□□□□ 0.47
CKS1B-202ENST00000368436 MRPL9Q9BYD2 267 aaKnown RBP17.98■□□□□ 0.47
CKS1B-202ENST00000368436 INO80BQ9C086 356 aaPredicted RBP17.98■□□□□ 0.47
CKS1B-202ENST00000368436 VAV3Q9UKW4 847 aa17.98■□□□□ 0.47
CKS1B-202ENST00000368436 STK36Q9NRP7 1315 aa17.98■□□□□ 0.47
CKS1B-202ENST00000368436 CDKL5O76039 1030 aa17.97■□□□□ 0.47
CKS1B-202ENST00000368436 SKIP12755 728 aa17.97■□□□□ 0.47
CKS1B-202ENST00000368436 SFPQP23246 707 aaKnown RBP eCLIP17.97■□□□□ 0.47
CKS1B-202ENST00000368436 TECP42680 631 aa17.97■□□□□ 0.47
CKS1B-202ENST00000368436 QARSP47897 775 aaKnown RBP17.97■□□□□ 0.47
CKS1B-202ENST00000368436 LETM2Q2VYF4 491 aa17.97■□□□□ 0.47
CKS1B-202ENST00000368436 TMC7Q7Z402 723 aa17.97■□□□□ 0.47
CKS1B-202ENST00000368436 RHPN2Q8IUC4 686 aa17.97■□□□□ 0.47
CKS1B-202ENST00000368436 KSR1Q8IVT5 923 aa17.97■□□□□ 0.47
CKS1B-202ENST00000368436 MRPL43Q8N983 215 aaKnown RBP17.97■□□□□ 0.47
CKS1B-202ENST00000368436 MFSD14AQ96MC6 490 aa17.97■□□□□ 0.47
CKS1B-202ENST00000368436 JPH2Q9BR39 696 aaPredicted RBP17.97■□□□□ 0.47
CKS1B-202ENST00000368436 CYP26B1Q9NR63 512 aa17.97■□□□□ 0.47
CKS1B-202ENST00000368436 ARID2Q68CP9 1835 aa17.96■□□□□ 0.47
CKS1B-202ENST00000368436 CCDC194A0A1B0GVG4 234 aa17.96■□□□□ 0.47
CKS1B-202ENST00000368436 DKC1O60832 514 aaKnown RBP eCLIP17.96■□□□□ 0.47
CKS1B-202ENST00000368436 ZNF623O75123 536 aa17.96■□□□□ 0.47
CKS1B-202ENST00000368436 GCFC2P16383 781 aaKnown RBP17.96■□□□□ 0.47
CKS1B-202ENST00000368436 HOXB8P17481 243 aaPredicted RBP17.96■□□□□ 0.47
CKS1B-202ENST00000368436 BCAR1P56945 870 aa17.96■□□□□ 0.47
CKS1B-202ENST00000368436 ZXDAP98168 799 aa17.96■□□□□ 0.47
CKS1B-202ENST00000368436 SMC1AQ14683 1233 aaKnown RBP17.96■□□□□ 0.47
CKS1B-202ENST00000368436 PLA2G4FQ68DD2 849 aa17.96■□□□□ 0.47
CKS1B-202ENST00000368436 TRIM67Q6ZTA4 783 aa17.96■□□□□ 0.47
CKS1B-202ENST00000368436 NEK8Q86SG6 692 aa17.96■□□□□ 0.47
CKS1B-202ENST00000368436 RPGRIP1Q96KN7 1286 aa17.96■□□□□ 0.47
CKS1B-202ENST00000368436 IFT122Q9HBG6 1241 aa17.96■□□□□ 0.47
CKS1B-202ENST00000368436 C2orf71A6NGG8 1288 aa17.95■□□□□ 0.46
CKS1B-202ENST00000368436 TBX3O15119 743 aa17.95■□□□□ 0.46
CKS1B-202ENST00000368436 PFKFB2O60825 505 aa17.95■□□□□ 0.46
CKS1B-202ENST00000368436 P4HBP07237 508 aaKnown RBP17.95■□□□□ 0.46
CKS1B-202ENST00000368436 XBP1P17861 261 aa17.95■□□□□ 0.46
CKS1B-202ENST00000368436 ALDH7A1P49419 539 aaKnown RBP17.95■□□□□ 0.46
CKS1B-202ENST00000368436 TWF2Q6IBS0 349 aaKnown RBP17.95■□□□□ 0.46
CKS1B-202ENST00000368436 LLGL2Q6P1M3 1020 aa17.95■□□□□ 0.46
CKS1B-202ENST00000368436 ZNF579Q8NAF0 562 aaKnown RBP17.95■□□□□ 0.46
CKS1B-202ENST00000368436 HAS1Q92839 578 aa17.95■□□□□ 0.46
CKS1B-202ENST00000368436 FBXL18Q96ME1 805 aa17.95■□□□□ 0.46
CKS1B-202ENST00000368436 SLKQ9H2G2 1235 aaPredicted RBP17.95■□□□□ 0.46
CKS1B-202ENST00000368436 DHX33Q9H6R0 707 aaKnown RBP17.95■□□□□ 0.46
CKS1B-202ENST00000368436 GJB4Q9NTQ9 266 aa17.95■□□□□ 0.46
CKS1B-202ENST00000368436 FAM105AQ9NUU6 356 aa17.95■□□□□ 0.46
CKS1B-202ENST00000368436 WRAP73Q9P2S5 460 aaPredicted RBP17.95■□□□□ 0.46
CKS1B-202ENST00000368436 TPCN1Q9ULQ1 816 aa17.95■□□□□ 0.46
CKS1B-202ENST00000368436 PIN4Q9Y237 131 aaKnown RBP17.95■□□□□ 0.46
CKS1B-202ENST00000368436 PPME1Q9Y570 386 aa17.95■□□□□ 0.46
CKS1B-202ENST00000368436 CARNS1A5YM72 827 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 NT5C1B-RDH14C9J2C7 533 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 CLASP2O75122 1294 aaKnown RBP17.94■□□□□ 0.46
CKS1B-202ENST00000368436 RAB27AP51159 221 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 NPEPPSP55786 919 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 EPHA7Q15375 998 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 CATSPER4Q7RTX7 472 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 EXOC8Q8IYI6 725 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 OXER1Q8TDS5 423 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms