RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 INPP4AQ96PE3 977 aaPredicted RBP9.62□□□□□ -0.87
THBS3-201ENST00000368378 AMFRQ9UKV5 643 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 SBF2Q86WG5 1849 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 F5H6K3 240 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 SHMT1P34896 483 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 IFI35P80217 286 aaPredicted RBP9.62□□□□□ -0.87
THBS3-201ENST00000368378 KLRC3Q07444 240 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 DDR1Q08345 913 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 ZNF844Q08AG5 666 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 PPP1R7Q15435 360 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 ALS2CLQ60I27 953 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 MMS22LQ6ZRQ5 1243 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 FAM178BQ8IXR5 827 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 IQCKQ8N0W5 287 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 CYFIP2Q96F07 1278 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 RBM17Q96I25 401 aaKnown RBP9.62□□□□□ -0.87
THBS3-201ENST00000368378 ELAC2Q9BQ52 826 aaKnown RBP9.62□□□□□ -0.87
THBS3-201ENST00000368378 HEMGNQ9BXL5 484 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 LRRC27Q9C0I9 530 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 NT5C3AQ9H0P0 336 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 AZI2Q9H6S1 392 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 FBXO28Q9NVF7 368 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 CDK5RAP2Q96SN8 1893 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 SMCHD1A6NHR9 2005 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 TCRBV7S2A1N4TA0A589 114 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 MEFVO15553 781 aaPredicted RBP9.61□□□□□ -0.87
THBS3-201ENST00000368378 SPOPO43791 374 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 IL1R1P14778 569 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 FOXD4Q12950 439 aaPredicted RBP9.61□□□□□ -0.87
THBS3-201ENST00000368378 IRF2BP2Q7Z5L9 587 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 TPCN2Q8NHX9 752 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 FBXO25Q8TCJ0 367 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 EPS8L3Q8TE67 593 aaKnown RBP9.61□□□□□ -0.87
THBS3-201ENST00000368378 MTFR1LQ9H019 292 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 EPN3Q9H201 632 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 KLHL11Q9NVR0 708 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 SSU72P8A0A1W2PR75 194 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 DLATP10515 647 aaKnown RBP9.61□□□□□ -0.87
THBS3-201ENST00000368378 HOXD13P35453 343 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 PSMD2Q13200 908 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 ZCWPW2Q504Y3 356 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 TBC1D1Q86TI0 1168 aaPredicted RBP9.61□□□□□ -0.87
THBS3-201ENST00000368378 CCDC13Q8IYE1 715 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 C1orf54Q8WWF1 131 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 AKT1S1Q96B36 256 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 IQCDQ96DY2 449 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 SAAL1Q96ER3 474 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 FMO2Q99518 471 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 EIF2AK1Q9BQI3 630 aaKnown RBP9.61□□□□□ -0.87
THBS3-201ENST00000368378 TMX4Q9H1E5 349 aaPredicted RBP9.61□□□□□ -0.87
THBS3-201ENST00000368378 KCTD10Q9H3F6 313 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 GPRC5CQ9NQ84 441 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 SUFUQ9UMX1 484 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 MYH4Q9Y623 1939 aa9.61□□□□□ -0.87
THBS3-201ENST00000368378 FOXN3O00409 490 aaPredicted RBP9.6□□□□□ -0.87
THBS3-201ENST00000368378 MSH4O15457 936 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 LCA5LO95447 670 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 HARSP12081 509 aaKnown RBP9.6□□□□□ -0.87
THBS3-201ENST00000368378 LONRF1Q17RB8 773 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 LRCH2Q5VUJ6 765 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 PPP4R3AQ6IN85 833 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 HIBCHQ6NVY1 386 aaPredicted RBP9.6□□□□□ -0.87
THBS3-201ENST00000368378 FBXO11Q86XK2 927 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 KIF2BQ8N4N8 673 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 ERMNQ8TAM6 284 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 TBC1D22AQ8WUA7 517 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 ATG4AQ8WYN0 398 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 SH3GL2Q99962 352 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 GANQ9H2C0 597 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 USTQ9Y2C2 406 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 K7ENM7 598 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 UPP2O95045 317 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 CREB1P16220 341 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 DR1Q01658 176 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 SLC29A2Q14542 456 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 COBLL1Q53SF7 1204 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 SYCP2LQ5T4T6 812 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 RBM26Q5T8P6 1007 aaKnown RBP9.6□□□□□ -0.87
THBS3-201ENST00000368378 B4GALNT4Q76KP1 1039 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 CDAN1Q8IWY9 1227 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 RNF10Q8N5U6 811 aaKnown RBP9.6□□□□□ -0.87
THBS3-201ENST00000368378 LNX1Q8TBB1 728 aaPredicted RBP9.6□□□□□ -0.87
THBS3-201ENST00000368378 RAPGEF5Q92565 580 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 CALR3Q96L12 384 aaKnown RBP9.6□□□□□ -0.87
THBS3-201ENST00000368378 CEP89Q96ST8 783 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 PRMT1Q99873 361 aaKnown RBP9.6□□□□□ -0.87
THBS3-201ENST00000368378 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.6□□□□□ -0.87
THBS3-201ENST00000368378 SEMA4AQ9H3S1 761 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 GDF3Q9NR23 364 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 CTNNAL1Q9UBT7 734 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 TCEAL9Q9UHQ7 104 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 ABCB11O95342 1321 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 CCDC169A6NNP5 214 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 PJA2O43164 708 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 GAS7O60861 476 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 SKAP2O75563 359 aaPredicted RBP9.6□□□□□ -0.87
THBS3-201ENST00000368378 MYBL1P10243 752 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 KRT5P13647 590 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 PRLRP16471 622 aa9.6□□□□□ -0.87
THBS3-201ENST00000368378 SMARCA1P28370 1054 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms