RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 KLHL5Q96PQ7 755 aa16.73■□□□□ 0.27
VAMP4-202ENST00000367740 CNNM2Q9H8M5 875 aa16.73■□□□□ 0.27
VAMP4-202ENST00000367740 SENP2Q9HC62 589 aa16.73■□□□□ 0.27
VAMP4-202ENST00000367740 KCNH7Q9NS40 1196 aa16.73■□□□□ 0.27
VAMP4-202ENST00000367740 SPATA6Q9NWH7 488 aaPredicted RBP16.73■□□□□ 0.27
VAMP4-202ENST00000367740 NFASCO94856 1347 aa16.72■□□□□ 0.27
VAMP4-202ENST00000367740 MYH9P35579 1960 aaKnown RBP16.72■□□□□ 0.27
VAMP4-202ENST00000367740 IGKV6D-21A0A0A0MT36 114 aa16.72■□□□□ 0.27
VAMP4-202ENST00000367740 LILRB5O75023 590 aa16.72■□□□□ 0.27
VAMP4-202ENST00000367740 ATG7O95352 703 aa16.72■□□□□ 0.27
VAMP4-202ENST00000367740 C22orf31O95567 290 aa16.72■□□□□ 0.27
VAMP4-202ENST00000367740 CNPP09543 421 aaKnown RBP16.72■□□□□ 0.27
VAMP4-202ENST00000367740 ZSCAN20P17040 1043 aaPredicted RBP16.72■□□□□ 0.27
VAMP4-202ENST00000367740 KLRC2P26717 231 aa16.72■□□□□ 0.27
VAMP4-202ENST00000367740 CSTF1Q05048 431 aaKnown RBP16.72■□□□□ 0.27
VAMP4-202ENST00000367740 TROAPQ12815 778 aa16.72■□□□□ 0.27
VAMP4-202ENST00000367740 STAMQ92783 540 aa16.72■□□□□ 0.27
VAMP4-202ENST00000367740 MAN1C1Q9NR34 630 aa16.72■□□□□ 0.27
VAMP4-202ENST00000367740 A0A0U1RQF3 1178 aa16.71■□□□□ 0.27
VAMP4-202ENST00000367740 SLC30A4O14863 429 aa16.71■□□□□ 0.27
VAMP4-202ENST00000367740 ITGB3BPQ13352 177 aaPredicted RBP16.71■□□□□ 0.27
VAMP4-202ENST00000367740 HTR4Q13639 388 aa16.71■□□□□ 0.27
VAMP4-202ENST00000367740 UBE2SQ16763 222 aa16.71■□□□□ 0.27
VAMP4-202ENST00000367740 IMMTQ16891 758 aaKnown RBP16.71■□□□□ 0.27
VAMP4-202ENST00000367740 CCDC60Q8IWA6 550 aaPredicted RBP16.71■□□□□ 0.27
VAMP4-202ENST00000367740 NELL1Q92832 810 aa16.71■□□□□ 0.27
VAMP4-202ENST00000367740 SDF4Q9BRK5 362 aa16.71■□□□□ 0.27
VAMP4-202ENST00000367740 EMILIN2Q9BXX0 1053 aa16.71■□□□□ 0.27
VAMP4-202ENST00000367740 BCO2Q9BYV7 579 aa16.71■□□□□ 0.27
VAMP4-202ENST00000367740 RHOBTB2Q9BYZ6 727 aa16.71■□□□□ 0.27
VAMP4-202ENST00000367740 ZSCAN32Q9NX65 697 aa16.71■□□□□ 0.27
VAMP4-202ENST00000367740 WDR81Q562E7 1941 aa16.7■□□□□ 0.26
VAMP4-202ENST00000367740 MTCL1Q9Y4B5 1905 aaKnown RBP16.7■□□□□ 0.26
VAMP4-202ENST00000367740 CCDC195A0A1B0GUA6 201 aa16.7■□□□□ 0.26
VAMP4-202ENST00000367740 ANHXE9PGG2 379 aa16.7■□□□□ 0.26
VAMP4-202ENST00000367740 GALTP07902 379 aa16.7■□□□□ 0.26
VAMP4-202ENST00000367740 DMWDQ09019 674 aa16.7■□□□□ 0.26
VAMP4-202ENST00000367740 ZNF484Q5JVG2 852 aa16.7■□□□□ 0.26
VAMP4-202ENST00000367740 NETO1Q8TDF5 533 aa16.7■□□□□ 0.26
VAMP4-202ENST00000367740 DDX23Q9BUQ8 820 aaKnown RBP16.7■□□□□ 0.26
VAMP4-202ENST00000367740 NRDE2Q9H7Z3 1164 aa16.7■□□□□ 0.26
VAMP4-202ENST00000367740 SH2B1Q9NRF2 756 aaPredicted RBP16.7■□□□□ 0.26
VAMP4-202ENST00000367740 MTF2Q9Y483 593 aaPredicted RBP16.7■□□□□ 0.26
VAMP4-202ENST00000367740 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.7■□□□□ 0.26
VAMP4-202ENST00000367740 NUMBLQ9Y6R0 609 aa16.7■□□□□ 0.26
VAMP4-202ENST00000367740 KANSL1LA0AUZ9 987 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 INPPL1O15357 1258 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 LILRB3O75022 631 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 CCNE2O96020 404 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 SSBP05455 408 aaKnown RBP eCLIP16.69■□□□□ 0.26
VAMP4-202ENST00000367740 LAMP2P13473 410 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 CYP26C1Q6V0L0 522 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 METTL13Q8N6R0 699 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 ST13P5Q8NFI4 369 aaPredicted RBP16.69■□□□□ 0.26
VAMP4-202ENST00000367740 SHDQ96IW2 340 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 SPZ1Q9BXG8 430 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 ADAMTS10Q9H324 1103 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 DNAJB4Q9UDY4 337 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 GMEB2Q9UKD1 530 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 ANGPTL2Q9UKU9 493 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 PCDHB15Q9Y5E8 787 aa16.69■□□□□ 0.26
VAMP4-202ENST00000367740 CARNS1A5YM72 827 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 BACH1O14867 736 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 TBC1D4O60343 1298 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 B4GALT3O60512 393 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 RFPL2O75678 378 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 SDSP20132 328 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 ATP4AP20648 1035 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 EIF4BP23588 611 aaKnown RBP16.68■□□□□ 0.26
VAMP4-202ENST00000367740 SLC11A1P49279 550 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 CLCN3P51790 818 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 NLRP11P59045 1033 aaKnown RBP16.68■□□□□ 0.26
VAMP4-202ENST00000367740 SPEM2Q0P670 501 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 ABHD15Q6UXT9 468 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 BBXQ8WY36 941 aaPredicted RBP16.68■□□□□ 0.26
VAMP4-202ENST00000367740 ZNF707Q96C28 371 aaPredicted RBP16.68■□□□□ 0.26
VAMP4-202ENST00000367740 RRP36Q96EU6 259 aaKnown RBP16.68■□□□□ 0.26
VAMP4-202ENST00000367740 MXRA8Q9BRK3 442 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 DSCC1Q9BVC3 393 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 PSTPIP2Q9H939 334 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 TBC1D13Q9NVG8 400 aa16.68■□□□□ 0.26
VAMP4-202ENST00000367740 CNOT1A5YKK6 2376 aaKnown RBP16.68■□□□□ 0.26
VAMP4-202ENST00000367740 SPDYE3A6NKU9 549 aa16.67■□□□□ 0.26
VAMP4-202ENST00000367740 FGFR4P22455 802 aa16.67■□□□□ 0.26
VAMP4-202ENST00000367740 SNW1Q13573 536 aaKnown RBP16.67■□□□□ 0.26
VAMP4-202ENST00000367740 UBXN2BQ14CS0 331 aa16.67■□□□□ 0.26
VAMP4-202ENST00000367740 FAM160B1Q5W0V3 765 aa16.67■□□□□ 0.26
VAMP4-202ENST00000367740 PDXDC2PQ6P474 469 aa16.67■□□□□ 0.26
VAMP4-202ENST00000367740 TSSK4Q6SA08 328 aa16.67■□□□□ 0.26
VAMP4-202ENST00000367740 GET4Q7L5D6 327 aaPredicted RBP16.67■□□□□ 0.26
VAMP4-202ENST00000367740 LINC01465Q8N7H1 131 aa16.67■□□□□ 0.26
VAMP4-202ENST00000367740 RSPH1Q8WYR4 309 aa16.67■□□□□ 0.26
VAMP4-202ENST00000367740 SMG7Q92540 1137 aaKnown RBP16.67■□□□□ 0.26
VAMP4-202ENST00000367740 RILPL2Q969X0 211 aa16.67■□□□□ 0.26
VAMP4-202ENST00000367740 ZNF668Q96K58 619 aaPredicted RBP16.67■□□□□ 0.26
VAMP4-202ENST00000367740 AGO4Q9HCK5 861 aaKnown RBP16.67■□□□□ 0.26
VAMP4-202ENST00000367740 PCDHA6Q9UN73 950 aa16.67■□□□□ 0.26
VAMP4-202ENST00000367740 PCDHA8Q9Y5H6 950 aa16.67■□□□□ 0.26
VAMP4-202ENST00000367740 DOCK6Q96HP0 2047 aa16.67■□□□□ 0.26
VAMP4-202ENST00000367740 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms