RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 ZFP42Q96MM3 310 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 ETNK1Q9HBU6 452 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 KLC4Q9NSK0 619 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 PRKAG2Q9UGJ0 569 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 G3BP2Q9UN86 482 aaKnown RBP13.21□□□□□ -0.29
TPR-201ENST00000367478 CHRNA3P32297 505 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 UBE3CQ15386 1083 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 SLFN13Q68D06 897 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 GANCQ8TET4 914 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 SH3TC2Q8TF17 1288 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 TAF5LO75529 589 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 MYBL1P10243 752 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 RPS8P62241 208 aaKnown RBP13.21□□□□□ -0.29
TPR-201ENST00000367478 CYP4A11Q02928 519 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 CSTF3Q12996 717 aaKnown RBP13.21□□□□□ -0.29
TPR-201ENST00000367478 PCYOX1LQ8NBM8 494 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 COG1Q8WTW3 980 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 MRPL1Q9BYD6 325 aaKnown RBP13.21□□□□□ -0.29
TPR-201ENST00000367478 FTOQ9C0B1 505 aaKnown RBP eCLIP13.21□□□□□ -0.29
TPR-201ENST00000367478 PSAPP07602 524 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 NUP62P37198 522 aaPredicted RBP13.21□□□□□ -0.29
TPR-201ENST00000367478 OR6B2Q6IFH4 312 aa13.21□□□□□ -0.29
TPR-201ENST00000367478 HMGXB3Q12766 1538 aa13.21□□□□□ -0.3
TPR-201ENST00000367478 ALKBH5Q6P6C2 394 aaKnown RBP13.21□□□□□ -0.3
TPR-201ENST00000367478 HSPH1Q92598 858 aa13.21□□□□□ -0.3
TPR-201ENST00000367478 CEP170P1Q96L14 293 aa13.21□□□□□ -0.3
TPR-201ENST00000367478 ATG3Q9NT62 314 aa13.21□□□□□ -0.3
TPR-201ENST00000367478 SLC7A5Q01650 507 aa13.21□□□□□ -0.3
TPR-201ENST00000367478 GPT2Q8TD30 523 aa13.21□□□□□ -0.3
TPR-201ENST00000367478 NDST4Q9H3R1 872 aa13.21□□□□□ -0.3
TPR-201ENST00000367478 C16orf89Q6UX73 402 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 ZNF594Q96JF6 807 aaPredicted RBP13.2□□□□□ -0.3
TPR-201ENST00000367478 FAM129AQ9BZQ8 928 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 PFASO15067 1338 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 OSBPP22059 807 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 BTN2A2Q8WVV5 523 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 ABCB6Q9NP58 842 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 H2AFY2Q9P0M6 372 aaPredicted RBP13.2□□□□□ -0.3
TPR-201ENST00000367478 CLIC4Q9Y696 253 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 CCNE1P24864 410 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
TPR-201ENST00000367478 SYDE1Q6ZW31 735 aaPredicted RBP13.2□□□□□ -0.3
TPR-201ENST00000367478 BBS7Q8IWZ6 715 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 WNT8AQ9H1J5 351 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 SCN3BQ9NY72 215 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 FBXO2Q9UK22 296 aaPredicted RBP13.2□□□□□ -0.3
TPR-201ENST00000367478 ARL2BPQ9Y2Y0 163 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 ARHGEF10O15013 1369 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 M0R2C6 588 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 GCP02774 474 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 HADHAP40939 763 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 SLC10A5Q5PT55 438 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 APOL6Q9BWW8 343 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 MAGED2Q9UNF1 606 aaPredicted RBP13.2□□□□□ -0.3
TPR-201ENST00000367478 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
TPR-201ENST00000367478 HSPA13P48723 471 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 PMS2P54278 862 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 SARM1Q6SZW1 724 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 PPHLN1Q8NEY8 458 aaKnown RBP13.2□□□□□ -0.3
TPR-201ENST00000367478 EPS8L2Q9H6S3 715 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 NXF1Q9UBU9 619 aaKnown RBP13.2□□□□□ -0.3
TPR-201ENST00000367478 SOWAHDA6NJG2 315 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 K7ERI5 159 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 TK2O00142 265 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 GPC5P78333 572 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 FNDC3AQ9Y2H6 1198 aaKnown RBP13.2□□□□□ -0.3
TPR-201ENST00000367478 GCC2Q8IWJ2 1684 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 FGAP02671 866 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 TNFAIP2Q03169 654 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 FASTKD5Q7L8L6 764 aaKnown RBP13.2□□□□□ -0.3
TPR-201ENST00000367478 SULF1Q8IWU6 871 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 EYA1Q99502 592 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 TMEM161AQ9NX61 479 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 ANAPC7Q9UJX3 599 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 C5orf58C9J3I9 102 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 HNRNPH2P55795 449 aaKnown RBP13.2□□□□□ -0.3
TPR-201ENST00000367478 MFN1Q8IWA4 741 aa13.2□□□□□ -0.3
TPR-201ENST00000367478 FAM187AA6NFU0 413 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 M0R3G1 203 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 NLRP11P59045 1033 aaKnown RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 LRRC47Q8N1G4 583 aaKnown RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 TMEM35BQ8NCS4 154 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 SNF8Q96H20 258 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 PRPF18Q99633 342 aaKnown RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 TAF1DQ9H5J8 278 aaPredicted RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 SMG5Q9UPR3 1016 aaKnown RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 KRT14P02533 472 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 HOXC9P31274 260 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 DCPSQ96C86 337 aaKnown RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 GNAT1P11488 350 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 DHX34Q14147 1143 aaKnown RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 CCDC142Q17RM4 750 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 BTNL9Q6UXG8 535 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 AP1M1Q9BXS5 423 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 CEP72Q9P209 647 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 SRPRBQ9Y5M8 271 aaKnown RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 SOX6P35712 828 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms