RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 CA8P35219 290 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 C16orf87Q6PH81 154 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 SRLQ86TD4 932 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 C3orf20Q8ND61 904 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 TNFRSF25Q93038 417 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 GINM1Q9NU53 330 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 INTS9Q9NV88 658 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 HPCAL4Q9UM19 191 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 AGTPBP1Q9UPW5 1226 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 KIAA0391O15091 583 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZMYND10O75800 440 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 KRT15P19012 456 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 MXI1P50539 228 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 FKBP1AP62942 108 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 CACNB1Q02641 598 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 FUT2Q10981 343 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 MAP7D3Q8IWC1 876 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 LRRC1Q9BTT6 524 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 ISCUQ9H1K1 167 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 TXLNGQ9NUQ3 528 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 NFU1Q9UMS0 254 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 RGPD8O14715 1765 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 TMEM253P0C7T8 217 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 BMP6P22004 513 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 GYS2P54840 703 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 KRT76Q01546 638 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 SLC7A5Q01650 507 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 AGBL2Q5U5Z8 902 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 DYDC2Q96IM9 177 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 SLC4A9Q96Q91 983 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 SUCLA2Q9P2R7 463 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 GTPBP10A4D1E9 387 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MEIS1O00470 390 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MAP2K7O14733 419 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 SOX5P35711 763 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 INPP1P49441 399 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 NBPF9Q3BBW0 867 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 SYDE1Q6ZW31 735 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MAEAQ7L5Y9 396 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 KRT27Q7Z3Y8 459 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ANKRD35Q8N283 1001 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 PPM1KQ8N3J5 372 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 INTS13Q9NVM9 706 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 A0A087X0B3 334 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ECEL1O95672 775 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 EEF1DP29692 281 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 SLFN12LQ6IEE8 588 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 SLC30A9Q6PML9 568 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ARHGEF18Q6ZSZ5 1173 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 XXYLT1Q8NBI6 393 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 CAVIN3Q969G5 261 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ATP6V1G3Q96LB4 118 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MAK16Q9BXY0 300 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 CHCHD3Q9NX63 227 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 HDAC6Q9UBN7 1215 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 SSX2IPQ9Y2D8 614 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 TCP10L2B9ZVM9 353 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MAN1A2O60476 641 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MYBL1P10243 752 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ATF2P15336 505 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 NFRKBQ6P4R8 1299 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 NLRP7Q8WX94 980 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 GJD4Q96KN9 370 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MRIQ9BWK5 157 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 UBE2TQ9NPD8 197 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 TRAF3IP3Q9Y228 551 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ROBO3Q96MS0 1386 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 P4HA1P13674 534 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 UCHL3P15374 230 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 TNNI1P19237 187 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MESDQ14696 234 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 CCDC14Q49A88 953 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 AFAP1L2Q8N4X5 818 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 DUSP9Q99956 384 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 CPVLQ9H3G5 476 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 KMT5AQ9NQR1 393 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 PPP1R12AO14974 1030 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ALAS1P13196 640 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 CCND2P30279 289 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MAPK4P31152 587 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 NSFP46459 744 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MMP14P50281 582 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 TMEM119Q4V9L6 283 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 NUDCD3Q8IVD9 361 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 MCPH1Q8NEM0 835 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 POMGNT1Q8WZA1 660 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 RIT2Q99578 217 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 OSBPL1AQ9BXW6 950 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 INTS2Q9H0H0 1204 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ANKZF1Q9H8Y5 726 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZCCHC17Q9NP64 241 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 IL17RBQ9NRM6 502 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 SEPT12Q8IYM1 358 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 FAM167BQ9BTA0 163 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 TUBB6Q9BUF5 446 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 SEMA6BQ9H3T3 888 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 DBNDD1Q9H9R9 158 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 PDHA1P08559 390 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 VAMP7P51809 220 aa5.75□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZYXQ15942 572 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms