RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 ELAC1Q9H777 363 aaKnown RBP9.74□□□□□ -0.85
HMGB1P39-201ENST00000366304 DZANK1Q9NVP4 752 aa9.74□□□□□ -0.85
HMGB1P39-201ENST00000366304 BAZ2BQ9UIF8 2168 aaKnown RBP9.74□□□□□ -0.85
HMGB1P39-201ENST00000366304 CACNA1IQ9P0X4 2223 aa9.74□□□□□ -0.85
HMGB1P39-201ENST00000366304 FASNP49327 2511 aaKnown RBP9.74□□□□□ -0.85
HMGB1P39-201ENST00000366304 SMAPO00193 183 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 CA8P35219 290 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 PPM1AP35813 382 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 PDE1AP54750 535 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 BCAR1P56945 870 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 ACTR2P61160 394 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 ITGB3BPQ13352 177 aaPredicted RBP9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 IFIT1BQ5T764 474 aaKnown RBP9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 THSD4Q6ZMP0 1018 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 CCDC149Q6ZUS6 474 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 OTOP3Q7RTS5 596 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 ZNF598Q86UK7 904 aaKnown RBP9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 NLRX1Q86UT6 975 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 CABP7Q86V35 215 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 LAPTM4BQ86VI4 370 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 ECHDC2Q86YB7 292 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 VPS52Q8N1B4 723 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 LRRC43Q8N309 656 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 GIMAP8Q8ND71 665 aaPredicted RBP9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 HELQQ8TDG4 1101 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 SETXQ7Z333 2677 aaKnown RBP9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 KAT6AQ92794 2004 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 FAM208BQ5VWN6 2430 aa9.73□□□□□ -0.85
HMGB1P39-201ENST00000366304 LAMA4Q16363 1823 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 PIK3CDO00329 1044 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 CCNE2O96020 404 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 VTNP04004 478 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 RPLP2P05387 115 aaKnown RBP9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 CTSAP10619 480 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 ATP4AP20648 1035 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 CRYBB1P53674 252 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 TROAPQ12815 778 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 MTMR1Q13613 665 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 PTPN14Q15678 1187 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 UBE2SQ16763 222 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 LETM2Q2VYF4 491 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 KIAA0319Q5VV43 1072 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 PHLDB3Q6NSJ2 640 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 RNF169Q8NCN4 708 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 SMARCC2Q8TAQ2 1214 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 ACSF2Q96CM8 615 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 ZFRQ96KR1 1074 aaKnown RBP9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 IL25Q9H293 177 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 CHMP4BQ9H444 224 aaKnown RBP9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 JPH1Q9HDC5 661 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 JADE2Q9NQC1 790 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 IGSF9Q9P2J2 1179 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 SIT1Q9Y3P8 196 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 MTF2Q9Y483 593 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 IRAK3Q9Y616 596 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 TAF6LQ9Y6J9 622 aa9.72□□□□□ -0.85
HMGB1P39-201ENST00000366304 IGKV6D-21A0A0A0MT36 114 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 MEIS3P2A8K0S8 358 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 C3orf80F5H4A9 247 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 GPR182O15218 404 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 LILRB3O75022 631 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 ATG7O95352 703 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 C22orf31O95567 290 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 MYBP10242 640 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 SRFP11831 508 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 FGFR4P22455 802 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 STAT5BP51692 787 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 CLCN4P51793 760 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 ZC3H14Q6PJT7 736 aaKnown RBP9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 PADI6Q6TGC4 694 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 PLPPR4Q7Z2D5 763 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 DDX53Q86TM3 631 aaKnown RBP9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 ANKK1Q8NFD2 765 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 PJA1Q8NG27 643 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 ZNF668Q96K58 619 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 KLHL5Q96PQ7 755 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 UBAC1Q9BSL1 405 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 RPP25Q9BUL9 199 aaKnown RBP9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 ADAMTS10Q9H324 1103 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 SFXN1Q9H9B4 322 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 ARHGEF3Q9NR81 526 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 KCNH7Q9NS40 1196 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 SLC9A2Q9UBY0 812 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 C2orf16Q68DN1 1984 aa9.71□□□□□ -0.86
HMGB1P39-201ENST00000366304 KINO60870 393 aaKnown RBP9.7□□□□□ -0.86
HMGB1P39-201ENST00000366304 CNPP09543 421 aaKnown RBP9.7□□□□□ -0.86
HMGB1P39-201ENST00000366304 SDSP20132 328 aa9.7□□□□□ -0.86
HMGB1P39-201ENST00000366304 COL9A3Q14050 684 aaPredicted RBP9.7□□□□□ -0.86
HMGB1P39-201ENST00000366304 CCDC60Q8IWA6 550 aaPredicted RBP9.7□□□□□ -0.86
HMGB1P39-201ENST00000366304 IGSF21Q96ID5 467 aa9.7□□□□□ -0.86
HMGB1P39-201ENST00000366304 AZI2Q9H6S1 392 aa9.7□□□□□ -0.86
HMGB1P39-201ENST00000366304 NCDNQ9UBB6 729 aa9.7□□□□□ -0.86
HMGB1P39-201ENST00000366304 EPS15L1Q9UBC2 864 aa9.7□□□□□ -0.86
HMGB1P39-201ENST00000366304 DNAJB4Q9UDY4 337 aa9.7□□□□□ -0.86
HMGB1P39-201ENST00000366304 CDV3Q9UKY7 258 aaKnown RBP9.7□□□□□ -0.86
HMGB1P39-201ENST00000366304 SMG5Q9UPR3 1016 aaKnown RBP9.7□□□□□ -0.86
HMGB1P39-201ENST00000366304 ANHXE9PGG2 379 aa9.69□□□□□ -0.86
HMGB1P39-201ENST00000366304 LILRB5O75023 590 aa9.69□□□□□ -0.86
HMGB1P39-201ENST00000366304 ZC3H11AO75152 810 aaKnown RBP eCLIP9.69□□□□□ -0.86
HMGB1P39-201ENST00000366304 CSDE1O75534 798 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms