RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SP2Q02086 613 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 LAMC2Q13753 1193 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 STXBP2Q15833 593 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 STX1AQ16623 288 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 USP49Q70CQ1 688 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 ADGRD2Q7Z7M1 963 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 FAM200AQ8TCP9 573 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 APBB2Q92870 758 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 ATP6V0A1Q93050 837 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 NKD2Q969F2 451 aaPredicted RBP12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 EPSTI1Q96J88 318 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 AK8Q96MA6 479 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 RIPOR3Q96MK2 946 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 MTMR9Q96QG7 549 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 C16orf70Q9BSU1 422 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 ANO3Q9BYT9 981 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 ANO10Q9NW15 660 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 TUBE1Q9UJT0 475 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 PLAGL2Q9UPG8 496 aa12.56□□□□□ -0.4
CSNK1E-202ENST00000366216 CYP3A7-CYP3A51PA0A087WV96 503 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 OPLAHO14841 1288 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 TREHO43280 583 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 ACTN4O43707 911 aaKnown RBP12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 CAND2O75155 1236 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 CTSHP09668 335 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 SLFN14P0C7P3 912 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 CYP3A7P24462 503 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 TXLNAP40222 546 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 HSDL1Q3SXM5 330 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 USP17L6PQ6QN14 398 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 ADSSL1Q8N142 457 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 SAMD3Q8N6K7 520 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 NSUN6Q8TEA1 469 aaKnown RBP12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 CRYGNQ8WXF5 182 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 ANP32BQ92688 251 aaKnown RBP12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 P2RX5Q93086 422 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 MBOAT7Q96N66 472 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 IWS1Q96ST2 819 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 CCSER1Q9C0I3 900 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 BARX2Q9UMQ3 279 aaPredicted RBP12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 PCDHGC5Q9Y5F6 944 aa12.55□□□□□ -0.4
CSNK1E-202ENST00000366216 MAP1BP46821 2468 aaKnown RBP12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 C17orf102A2RUQ5 167 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 SPDYE3A6NKU9 549 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 GCOM1H8Y6P7 765 aaPredicted RBP12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 PPFIA4O75335 1185 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 POLR2MP0CAP2 368 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 ARP10275 920 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 ATF7P17544 494 aaPredicted RBP12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 EIF2AK2P19525 551 aaKnown RBP12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 SREBF1P36956 1147 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 NRIP1P48552 1158 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 RBM10P98175 930 aaKnown RBP12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 GHRHRQ02643 423 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 BTG3Q14201 252 aaPredicted RBP12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 CALCRLQ16602 461 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 ANO6Q4KMQ2 910 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 FRMD5Q7Z6J6 570 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 IQUBQ8NA54 791 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 RNF214Q8ND24 703 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 IL31RAQ8NI17 732 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 PANK2Q9BZ23 570 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 SERTAD1Q9UHV2 236 aa12.54□□□□□ -0.4
CSNK1E-202ENST00000366216 CHD6Q8TD26 2715 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 DENND4AQ7Z401 1863 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 A0A087X0B3 334 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 MED19A0JLT2 244 aaPredicted RBP12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 KRT37O76014 449 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 TDP2O95551 362 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 CYP3A4P08684 503 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 CIITAP33076 1130 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 NLRP12P59046 1061 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 ARHGAP4P98171 946 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 PDIA5Q14554 519 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 POSTNQ15063 836 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 ZRSR1Q15695 479 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 E2F4Q16254 413 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 NT5DC1Q5TFE4 455 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 ZBTB33Q86T24 672 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 CEP57L1Q8IYX8 460 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 HS6ST3Q8IZP7 471 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 TMEM105Q8N8V8 129 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 IGSF22Q8N9C0 903 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 SUSD6Q92537 303 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 DHX58Q96C10 678 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 ZNF689Q96CS4 500 aaPredicted RBP12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 RMDN3Q96TC7 470 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 RAB34Q9BZG1 259 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 MAF1Q9H063 256 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 RNPEPQ9H4A4 650 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 EHMT1Q9H9B1 1298 aa12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 MAP3K20Q9NYL2 800 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 DDX25Q9UHL0 483 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-202ENST00000366216 EVPLQ92817 2033 aa12.52□□□□□ -0.4
CSNK1E-202ENST00000366216 TBX3O15119 743 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 SLC37A4O43826 429 aa12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 EIF3JO75822 258 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-202ENST00000366216 ITGB1P05556 798 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms