RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 ASB15Q8WXK1 588 aa2.33□□□□□ -2.04
MIR539-201ENST00000365690 CAVIN3Q969G5 261 aa2.33□□□□□ -2.04
MIR539-201ENST00000365690 HAPLN2Q9GZV7 340 aa2.33□□□□□ -2.04
MIR539-201ENST00000365690 AKIP1Q9NQ31 210 aa2.33□□□□□ -2.04
MIR539-201ENST00000365690 SFMBT1Q9UHJ3 866 aa2.33□□□□□ -2.04
MIR539-201ENST00000365690 ZNF580Q9UK33 172 aa2.33□□□□□ -2.04
MIR539-201ENST00000365690 CBLCQ9ULV8 474 aa2.33□□□□□ -2.04
MIR539-201ENST00000365690 PRAMEF22A3QJZ6 481 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 UNC119BA6NIH7 251 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 ZNF561-AS1K7EIQ3 104 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 WNT9AO14904 365 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 TOX4O94842 621 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 NDUFA10O95299 355 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 VSIG10L2P0DP72 767 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 EGR2P11161 476 aaPredicted RBP2.32□□□□□ -2.04
MIR539-201ENST00000365690 GYPEP15421 78 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 SIM1P81133 766 aaPredicted RBP2.32□□□□□ -2.04
MIR539-201ENST00000365690 SCAPQ12770 1279 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 ERCC6LQ2NKX8 1250 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 STYK1Q6J9G0 422 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 APBB1IPQ7Z5R6 666 aaPredicted RBP2.32□□□□□ -2.04
MIR539-201ENST00000365690 OR52N2Q8NGI0 321 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 GCDHQ92947 438 aaPredicted RBP2.32□□□□□ -2.04
MIR539-201ENST00000365690 OSBP2Q969R2 916 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 PPP1R10Q96QC0 940 aaKnown RBP2.32□□□□□ -2.04
MIR539-201ENST00000365690 ZFYVE21Q9BQ24 234 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 SMURF1Q9HCE7 757 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 MTMR4Q9NYA4 1195 aa2.32□□□□□ -2.04
MIR539-201ENST00000365690 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 GOLGA8BA8MQT2 603 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 LEFTY2O00292 366 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 TP73O15350 636 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 CLASP2O75122 1294 aaKnown RBP2.31□□□□□ -2.04
MIR539-201ENST00000365690 H2AFYO75367 372 aaKnown RBP2.31□□□□□ -2.04
MIR539-201ENST00000365690 RECQL4O94761 1208 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 BMPR1AP36894 532 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 TP53BP2Q13625 1128 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 SPIDRQ14159 915 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 SLC10A6Q3KNW5 377 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 MAMDC2Q7Z304 686 aaPredicted RBP2.31□□□□□ -2.04
MIR539-201ENST00000365690 ARHGEF25Q86VW2 580 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 IFNL3Q8IZI9 196 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 PLA2G15Q8NCC3 412 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 GFM2Q969S9 779 aaKnown RBP2.31□□□□□ -2.04
MIR539-201ENST00000365690 GPRASP2Q96D09 838 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 NDC1Q9BTX1 674 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 DUSP26Q9BV47 211 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 ENKD1Q9H0I2 346 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 KMT5AQ9NQR1 393 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 EIF2B4Q9UI10 523 aaKnown RBP2.31□□□□□ -2.04
MIR539-201ENST00000365690 DENND2AQ9ULE3 1009 aa2.31□□□□□ -2.04
MIR539-201ENST00000365690 CACNA1IQ9P0X4 2223 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 GOLGA6L22H0YM25 854 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 NTN1O95631 604 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 CBSLP0DN79 551 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 ZSCAN20P17040 1043 aaPredicted RBP2.3□□□□□ -2.04
MIR539-201ENST00000365690 APEX1P27695 318 aaKnown RBP2.3□□□□□ -2.04
MIR539-201ENST00000365690 CBSP35520 551 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 RARRES1P49788 294 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 SESN2P58004 480 aaPredicted RBP2.3□□□□□ -2.04
MIR539-201ENST00000365690 ZNF169Q14929 603 aaPredicted RBP2.3□□□□□ -2.04
MIR539-201ENST00000365690 VPS72Q15906 364 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 C11orf87Q6NUJ2 197 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 ZNF517Q6ZMY9 492 aaPredicted RBP2.3□□□□□ -2.04
MIR539-201ENST00000365690 ZNF788Q6ZQV5 615 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 GDF7Q7Z4P5 450 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 PDPRQ8NCN5 879 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 CPEB3Q8NE35 698 aaKnown RBP2.3□□□□□ -2.04
MIR539-201ENST00000365690 PCDH19Q8TAB3 1148 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 CAGE1Q8TC20 777 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 DDB2Q92466 427 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 DPF1Q92782 380 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 FOXRED1Q96CU9 486 aaPredicted RBP2.3□□□□□ -2.04
MIR539-201ENST00000365690 SPATA32Q96LK8 384 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 ZNF48Q96MX3 618 aaPredicted RBP2.3□□□□□ -2.04
MIR539-201ENST00000365690 GBP4Q96PP9 640 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 LSM14BQ9BX40 385 aaKnown RBP2.3□□□□□ -2.04
MIR539-201ENST00000365690 BACH2Q9BYV9 841 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 TRPM5Q9NZQ8 1165 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 FOXJ2Q9P0K8 574 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 RCAN3Q9UKA8 241 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 MAST3O60307 1309 aa2.3□□□□□ -2.04
MIR539-201ENST00000365690 MARCH11A6NNE9 402 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 RNASET2O00584 256 aaKnown RBP2.29□□□□□ -2.04
MIR539-201ENST00000365690 HOXA3O43365 443 aaPredicted RBP2.29□□□□□ -2.04
MIR539-201ENST00000365690 SPDEFO95238 335 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 RASGRP1O95267 797 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 CELA2AP08217 269 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 PYGMP11217 842 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 KRT15P19012 456 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 GNAT2P19087 354 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 GJA8P48165 433 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 SSBP2P81877 361 aaPredicted RBP2.29□□□□□ -2.04
MIR539-201ENST00000365690 MPP3Q13368 585 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 ABHD17BQ5VST6 288 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 BMP8AQ7Z5Y6 402 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 RTN4RL1Q86UN2 441 aaPredicted RBP2.29□□□□□ -2.04
MIR539-201ENST00000365690 SYT12Q8IV01 421 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 NOSTRINQ8IVI9 506 aa2.29□□□□□ -2.04
MIR539-201ENST00000365690 CMTM4Q8IZR5 234 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms