RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 ZNF503-AS2A6NEH8 195 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 PAPLNO95428 1278 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 ATF2P15336 505 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 ITGB5P18084 799 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 PDCP20941 246 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 IGFBP6P24592 240 aaPredicted RBP4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 CDK17Q00537 523 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 MALLQ13021 153 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 ADAM9Q13443 819 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 GALEQ14376 348 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 ZNF267Q14586 743 aaPredicted RBP4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 DPP8Q6V1X1 898 aaPredicted RBP4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 KSR2Q6VAB6 950 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 USP45Q70EL2 814 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 GAREM2Q75VX8 874 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 CHST15Q7LFX5 561 aaPredicted RBP4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 PPM1NQ8N819 430 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 PPP1R14CQ8TAE6 165 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 WDR48Q8TAF3 677 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 PMM1Q92871 262 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 TIFAQ96CG3 184 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 PAWRQ96IZ0 340 aaKnown RBP4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 HIST1H2AHQ96KK5 128 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 HIST1H2AJQ99878 128 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 NOL10Q9BSC4 688 aaKnown RBP4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 CNTD2Q9H8S5 307 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 KCND1Q9NSA2 647 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 DDX20Q9UHI6 824 aaKnown RBP4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 EVLQ9UI08 416 aaPredicted RBP4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 SCOCQ9UIL1 159 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 USP18Q9UMW8 372 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 PTPN22Q9Y2R2 807 aa4.83□□□□□ -1.64
RNU6-28P-201ENST00000362378 FRMPD2Q68DX3 1309 aaPredicted RBP4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 MYOCOSA0A1B0GUC4 107 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 NRP2O60462 931 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 CTNND1O60716 968 aaKnown RBP4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 SEC24DO94855 1032 aaPredicted RBP4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 CHGBP05060 677 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 PFKLP17858 780 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 EDNRBP24530 442 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 MC3RP41968 323 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 CDR1P51861 262 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 ITGA1P56199 1179 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 CD83Q01151 205 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 UAP1L1Q3KQV9 507 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 BTNL9Q6UXG8 535 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 CATIPQ7Z7H3 387 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 ZNF605Q86T29 641 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 FAM43AQ8N2R8 423 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 PJA1Q8NG27 643 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 OR5AN1Q8NGI8 311 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 SMARCC2Q8TAQ2 1214 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 DIS3LQ8TF46 1054 aaKnown RBP4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 TTC17Q96AE7 1141 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 C1GALT1C1Q96EU7 318 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 MVB12AQ96EY5 273 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 FAM193BQ96PV7 902 aaPredicted RBP4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 WRNIP1Q96S55 665 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 MAP3K14Q99558 947 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 SYT3Q9BQG1 590 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 GORASP1Q9BQQ3 440 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 TACO1Q9BSH4 297 aaKnown RBP4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 ZFP64Q9NPA5 681 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 DDX21Q9NR30 783 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 CHST12Q9NRB3 414 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 SIRT5Q9NXA8 310 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 SAP30BPQ9UHR5 308 aaKnown RBP4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 MBD1Q9UIS9 605 aaPredicted RBP4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 ZFP69BQ9UJL9 534 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 IPPQ9Y573 584 aa4.82□□□□□ -1.64
RNU6-28P-201ENST00000362378 A0A0A6YYK5 440 aaPredicted RBP4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 TEX51A0A1B0GUA7 166 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 TPD52L2O43399 206 aaKnown RBP4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 HTRA2O43464 458 aaPredicted RBP4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 HRGP04196 525 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 PHKG2P15735 406 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 XPAP23025 273 aaPredicted RBP4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 MCAMP43121 646 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 GLRBP48167 497 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 MAP3K12Q12852 859 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 BIRC2Q13490 618 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 RTP5Q14D33 572 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 DGKDQ16760 1214 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 MUM1L1Q5H9M0 696 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 TMEM200BQ69YZ2 307 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 GRAMD4Q6IC98 578 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 PPP4R4Q6NUP7 873 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 IGDCC3Q8IVU1 814 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 BCL6BQ8N143 479 aaPredicted RBP4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 SAMD3Q8N6K7 520 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 STPG3Q8N7X2 389 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 TTLL6Q8N841 843 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 LINC00482Q8N8I6 264 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 MZB1Q8WU39 189 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 NRG4Q8WWG1 115 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 FAM168AQ92567 244 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 CLIC6Q96NY7 704 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms