RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 KRT1P04264 644 aa14.93□□□□□ -0.02
CTR9-201ENST00000361367 TBXAS1P24557 533 aaPredicted RBP14.93□□□□□ -0.02
CTR9-201ENST00000361367 ARL4AP40617 200 aa14.93□□□□□ -0.02
CTR9-201ENST00000361367 MXRA7P84157 204 aa14.93□□□□□ -0.02
CTR9-201ENST00000361367 CATSPER3Q86XQ3 398 aa14.93□□□□□ -0.02
CTR9-201ENST00000361367 RHOT2Q8IXI1 618 aa14.93□□□□□ -0.02
CTR9-201ENST00000361367 FBXL13Q8NEE6 735 aa14.93□□□□□ -0.02
CTR9-201ENST00000361367 RNF139Q8WU17 664 aa14.93□□□□□ -0.02
CTR9-201ENST00000361367 INTS2Q9H0H0 1204 aaKnown RBP14.93□□□□□ -0.02
CTR9-201ENST00000361367 MROH8Q9H579 483 aa14.93□□□□□ -0.02
CTR9-201ENST00000361367 PIN4Q9Y237 131 aaKnown RBP14.93□□□□□ -0.02
CTR9-201ENST00000361367 PASKQ96RG2 1323 aa14.93□□□□□ -0.02
CTR9-201ENST00000361367 LRRD1A4D1F6 860 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 PGRMC1O00264 195 aaKnown RBP14.92□□□□□ -0.02
CTR9-201ENST00000361367 ATF2P15336 505 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 CXCR5P32302 372 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 SREBF1P36956 1147 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 CDC42EP1Q00587 391 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 DRAP1Q14919 205 aaPredicted RBP14.92□□□□□ -0.02
CTR9-201ENST00000361367 BRD3Q15059 726 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 GNASQ5JWF2 1037 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 DHX40Q8IX18 779 aaKnown RBP14.92□□□□□ -0.02
CTR9-201ENST00000361367 KCTD17Q8N5Z5 321 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 KRT12Q99456 494 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 NFIBO00712 420 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 PRPSAP2O60256 369 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 RFC5P40937 340 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 LAMC2Q13753 1193 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 CFAP157Q5JU67 520 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 THEM5Q8N1Q8 247 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 TTC26A0AVF1 554 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 MOXD1Q6UVY6 613 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 RDM1Q8NG50 284 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 KIF12Q96FN5 646 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 NGRNQ9NPE2 291 aaKnown RBP14.92□□□□□ -0.02
CTR9-201ENST00000361367 CALCOCO1Q9P1Z2 691 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 SLC12A6Q9UHW9 1150 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 SCINQ9Y6U3 715 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 TYW5A2RUC4 315 aaKnown RBP14.92□□□□□ -0.02
CTR9-201ENST00000361367 KIAA0391O15091 583 aaKnown RBP14.92□□□□□ -0.02
CTR9-201ENST00000361367 HBP1O60381 514 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 ACTR2P61160 394 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 GUCY2DQ02846 1103 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 LMNB2Q03252 620 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 C6orf163Q5TEZ5 329 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 SRGAP1Q7Z6B7 1085 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 MICAL1Q8TDZ2 1067 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 HINFPQ9BQA5 517 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 POLR3CQ9BUI4 534 aaPredicted RBP14.92□□□□□ -0.02
CTR9-201ENST00000361367 RRAGCQ9HB90 399 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 ANKEF1Q9NU02 776 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 SAMD15Q9P1V8 674 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 RSPH14Q9UHP6 348 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 TUBE1Q9UJT0 475 aa14.92□□□□□ -0.02
CTR9-201ENST00000361367 CXCL11O14625 94 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 PGK2P07205 417 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 VIMP08670 466 aaKnown RBP14.91□□□□□ -0.02
CTR9-201ENST00000361367 CTSHP09668 335 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 RARBP10826 455 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 ZNF746Q6NUN9 644 aaPredicted RBP14.91□□□□□ -0.02
CTR9-201ENST00000361367 FBXL16Q8N461 479 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 HSPBP1Q9NZL4 362 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 FAM198AQ9UFP1 575 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 ZBTB24O43167 697 aaPredicted RBP14.91□□□□□ -0.02
CTR9-201ENST00000361367 PTPAQ15257 358 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 LMBRD2Q68DH5 695 aaPredicted RBP14.91□□□□□ -0.02
CTR9-201ENST00000361367 PASD1Q8IV76 773 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 URGCPQ8TCY9 931 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 FAM217BQ9NTX9 383 aaPredicted RBP14.91□□□□□ -0.02
CTR9-201ENST00000361367 CNOT8Q9UFF9 292 aaKnown RBP14.91□□□□□ -0.02
CTR9-201ENST00000361367 PTPN22Q9Y2R2 807 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 CTNNA1P35221 906 aaKnown RBP14.91□□□□□ -0.02
CTR9-201ENST00000361367 AP3M2P53677 418 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 PKN1Q16512 942 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 GEN1Q17RS7 908 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 SGO2Q562F6 1265 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 ACAP3Q96P50 834 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 PITPNM2Q9BZ72 1349 aa14.91□□□□□ -0.02
CTR9-201ENST00000361367 MAN1A1P33908 653 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 ACOT2P49753 483 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 FCGRTP55899 365 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 FMR1Q06787 632 aaKnown RBP eCLIP14.9□□□□□ -0.022e-7■□□□□ 11
CTR9-201ENST00000361367 DGKDQ16760 1214 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 KYAT1Q16773 422 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 RASGRP2Q7LDG7 609 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 PLEKHH3Q7Z736 793 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 SAMD3Q8N6K7 520 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 BBOF1Q8ND07 529 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 CCNYQ8ND76 341 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 AFAP1L1Q8TED9 768 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 FBF1Q8TES7 1133 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 GPRC5DQ9NZD1 345 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 OGFRQ9NZT2 677 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 ANKRD26Q9UPS8 1709 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 ZBBXA8MT70 800 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 ZNF18P17022 549 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 TCF7P36402 384 aaPredicted RBP14.9□□□□□ -0.02
CTR9-201ENST00000361367 SLC12A2P55011 1212 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 DYNLT1P63172 113 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 LRRC71Q8N4P6 559 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms