RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 CLTAP09496 248 aa17.57■□□□□ 0.4
IFT140-201ENST00000361339 PAK2Q13177 524 aa17.57■□□□□ 0.4
IFT140-201ENST00000361339 STYK1Q6J9G0 422 aa17.57■□□□□ 0.4
IFT140-201ENST00000361339 ZSWIM2Q8NEG5 633 aa17.57■□□□□ 0.4
IFT140-201ENST00000361339 MDM1Q8TC05 714 aa17.57■□□□□ 0.4
IFT140-201ENST00000361339 GGT7Q9UJ14 662 aa17.57■□□□□ 0.4
IFT140-201ENST00000361339 DCDC2CA8MYV0 355 aa17.56■□□□□ 0.4
IFT140-201ENST00000361339 TBX3O15119 743 aa17.56■□□□□ 0.4
IFT140-201ENST00000361339 EYA4O95677 639 aa17.56■□□□□ 0.4
IFT140-201ENST00000361339 FOSP01100 380 aaPredicted RBP17.56■□□□□ 0.4
IFT140-201ENST00000361339 AIPL1Q9NZN9 384 aa17.56■□□□□ 0.4
IFT140-201ENST00000361339 COL20A1Q9P218 1284 aa17.56■□□□□ 0.4
IFT140-201ENST00000361339 L3MBTL1Q9Y468 752 aa17.56■□□□□ 0.4
IFT140-201ENST00000361339 GMNCA6NCL1 334 aa17.56■□□□□ 0.4
IFT140-201ENST00000361339 GFPT2O94808 682 aa17.56■□□□□ 0.4
IFT140-201ENST00000361339 ITGB3BPQ13352 177 aaPredicted RBP17.56■□□□□ 0.4
IFT140-201ENST00000361339 CFAP221Q4G0U5 840 aa17.56■□□□□ 0.4
IFT140-201ENST00000361339 C1orf186Q6ZWK4 172 aa17.56■□□□□ 0.4
IFT140-201ENST00000361339 FIZ1Q96SL8 496 aa17.56■□□□□ 0.4
IFT140-201ENST00000361339 HOMER2Q9NSB8 354 aa17.56■□□□□ 0.4
IFT140-201ENST00000361339 NOVA2Q9UNW9 492 aaKnown RBP17.56■□□□□ 0.4
IFT140-201ENST00000361339 HGSO14964 777 aaPredicted RBP17.55■□□□□ 0.4
IFT140-201ENST00000361339 FAM13AO94988 1023 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 CAVIN3Q969G5 261 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 EDEM3Q9BZQ6 932 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 TYW1Q9NV66 732 aaKnown RBP17.55■□□□□ 0.4
IFT140-201ENST00000361339 TMX2Q9Y320 296 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 SMIM23A6NLE4 172 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 GAS7O60861 476 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 MYO1EQ12965 1108 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 BIRC2Q13490 618 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 CBWD6Q4V339 395 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 CBWD3Q5JTY5 395 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 CBWD5Q5RIA9 395 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 FOXR2Q6PJQ5 311 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 SPATS2Q86XZ4 545 aaKnown RBP17.55■□□□□ 0.4
IFT140-201ENST00000361339 ELMO3Q96BJ8 720 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 SEC16BQ96JE7 1060 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 TRIM6Q9C030 488 aaPredicted RBP17.55■□□□□ 0.4
IFT140-201ENST00000361339 A1CFQ9NQ94 594 aaKnown RBP17.55■□□□□ 0.4
IFT140-201ENST00000361339 GCOM1H8Y6P7 765 aaPredicted RBP17.55■□□□□ 0.4
IFT140-201ENST00000361339 PDXKO00764 312 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 UPP2O95045 317 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 MYZAPP0CAP1 466 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 POLR2MP0CAP2 368 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 CTNNA1P35221 906 aaKnown RBP17.55■□□□□ 0.4
IFT140-201ENST00000361339 SCTRP47872 440 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 GRIPAP1Q4V328 841 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 FRMD5Q7Z6J6 570 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 TRIM31Q9BZY9 425 aa17.55■□□□□ 0.4
IFT140-201ENST00000361339 NFIBO00712 420 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 RAD51CO43502 376 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 CCNHP51946 323 aaPredicted RBP17.54■□□□□ 0.4
IFT140-201ENST00000361339 FKBP1AP62942 108 aaKnown RBP17.54■□□□□ 0.4
IFT140-201ENST00000361339 EN1Q05925 392 aaPredicted RBP17.54■□□□□ 0.4
IFT140-201ENST00000361339 SYN2Q92777 582 aaPredicted RBP17.54■□□□□ 0.4
IFT140-201ENST00000361339 STAMBPL1Q96FJ0 436 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 SGSM3Q96HU1 749 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 POLR3CQ9BUI4 534 aaPredicted RBP17.54■□□□□ 0.4
IFT140-201ENST00000361339 AP1M1Q9BXS5 423 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 CNOT8Q9UFF9 292 aaKnown RBP17.54■□□□□ 0.4
IFT140-201ENST00000361339 CALUO43852 315 aaPredicted RBP17.54■□□□□ 0.4
IFT140-201ENST00000361339 CYP3A4P08684 503 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 GCKP35557 465 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 DLGAP5Q15398 846 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 NBPF9Q3BBW0 867 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 ANKRD20A8PQ5CZ79 823 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 LDHDQ86WU2 507 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 CPXCR1Q8N123 301 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 ZNF577Q9BSK1 485 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 ARHGEF10LQ9HCE6 1279 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 LRRC4CQ9HCJ2 640 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 NAGPAQ9UK23 515 aa17.54■□□□□ 0.4
IFT140-201ENST00000361339 BUB1BO60566 1050 aaPredicted RBP17.53■□□□□ 0.4
IFT140-201ENST00000361339 EGFRP00533 1210 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 ITGB5P18084 799 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 MEI1Q5TIA1 1274 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 PPP4R3CPQ6ZMV5 832 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 PALB2Q86YC2 1186 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 CNKSR1Q969H4 720 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 BORCS6Q96GS4 357 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 TACO1Q9BSH4 297 aaKnown RBP17.53■□□□□ 0.4
IFT140-201ENST00000361339 WDR11Q9BZH6 1224 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 PCIF1Q9H4Z3 704 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 A0A1B0GUA9 196 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 PIK3CDO00329 1044 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 DDX3XO00571 662 aaKnown RBP eCLIP17.53■□□□□ 0.4
IFT140-201ENST00000361339 KCNK3O14649 394 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 PRLRP16471 622 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 CEP55Q53EZ4 464 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 ALKBH5Q6P6C2 394 aaKnown RBP17.53■□□□□ 0.4
IFT140-201ENST00000361339 RSBN1LQ6PCB5 846 aaPredicted RBP17.53■□□□□ 0.4
IFT140-201ENST00000361339 TBC1D1Q86TI0 1168 aaPredicted RBP17.53■□□□□ 0.4
IFT140-201ENST00000361339 CACNA2D3Q8IZS8 1091 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 OLIG1Q8TAK6 271 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 HVCN1Q96D96 273 aa17.53■□□□□ 0.4
IFT140-201ENST00000361339 CHORDC1Q9UHD1 332 aaPredicted RBP17.53■□□□□ 0.4
IFT140-201ENST00000361339 A6NNZ2 444 aa17.52■□□□□ 0.4
IFT140-201ENST00000361339 FLT3P36888 993 aa17.52■□□□□ 0.4
IFT140-201ENST00000361339 DLG4P78352 724 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms