RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 FAM86C1Q9NVL1 165 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 VPS54Q9P1Q0 977 aa23.8■■□□□ 1.4
CD47-202ENST00000361309 CFAP54Q96N23 3096 aa23.79■■□□□ 1.4
CD47-202ENST00000361309 PDGFBP01127 241 aaPredicted RBP23.79■■□□□ 1.4
CD47-202ENST00000361309 ALDH7A1P49419 539 aaKnown RBP23.79■■□□□ 1.4
CD47-202ENST00000361309 USP11P51784 963 aa23.79■■□□□ 1.4
CD47-202ENST00000361309 JAK3P52333 1124 aa23.79■■□□□ 1.4
CD47-202ENST00000361309 ITIH3Q06033 890 aa23.79■■□□□ 1.4
CD47-202ENST00000361309 TARBP2Q15633 366 aaKnown RBP23.79■■□□□ 1.4
CD47-202ENST00000361309 BLOC1S2Q6QNY1 142 aa23.79■■□□□ 1.4
CD47-202ENST00000361309 KREMEN2Q8NCW0 462 aa23.79■■□□□ 1.4
CD47-202ENST00000361309 KCNB2Q92953 911 aa23.79■■□□□ 1.4
CD47-202ENST00000361309 RIPOR3Q96MK2 946 aa23.79■■□□□ 1.4
CD47-202ENST00000361309 SLC26A6Q9BXS9 759 aa23.79■■□□□ 1.4
CD47-202ENST00000361309 RNF26Q9BY78 433 aaPredicted RBP23.79■■□□□ 1.4
CD47-202ENST00000361309 C2CD4DB7Z1M9 353 aa23.78■■□□□ 1.4
CD47-202ENST00000361309 CXCL14O95715 111 aa23.78■■□□□ 1.4
CD47-202ENST00000361309 MTERF2Q49AM1 385 aa23.78■■□□□ 1.4
CD47-202ENST00000361309 TMEM169Q96HH4 297 aa23.78■■□□□ 1.4
CD47-202ENST00000361309 NECTIN4Q96NY8 510 aa23.78■■□□□ 1.4
CD47-202ENST00000361309 GCOM2Q9BZD3 368 aaPredicted RBP23.78■■□□□ 1.4
CD47-202ENST00000361309 SEPT9Q9UHD8 586 aaPredicted RBP23.78■■□□□ 1.4
CD47-202ENST00000361309 SNX14Q9Y5W7 946 aa23.78■■□□□ 1.4
CD47-202ENST00000361309 PLXNA3P51805 1871 aa23.77■■□□□ 1.4
CD47-202ENST00000361309 TMEM150BA6NC51 233 aa23.77■■□□□ 1.4
CD47-202ENST00000361309 BMS1Q14692 1282 aaKnown RBP23.77■■□□□ 1.4
CD47-202ENST00000361309 VPS52Q8N1B4 723 aa23.77■■□□□ 1.4
CD47-202ENST00000361309 NIFKQ9BYG3 293 aaKnown RBP23.77■■□□□ 1.4
CD47-202ENST00000361309 CHST12Q9NRB3 414 aa23.77■■□□□ 1.4
CD47-202ENST00000361309 A0A087WZ62 844 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 ZC3H11AO75152 810 aaKnown RBP eCLIP23.76■■□□□ 1.39
CD47-202ENST00000361309 PSMD10O75832 226 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 WEE2P0C1S8 567 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 IFNAR1P17181 557 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 PHKA2P46019 1235 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 MTMR3Q13615 1198 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 LONRF3Q496Y0 759 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 RARS2Q5T160 578 aaKnown RBP23.76■■□□□ 1.39
CD47-202ENST00000361309 MIER3Q7Z3K6 550 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 TMEM173Q86WV6 379 aaPredicted RBP23.76■■□□□ 1.39
CD47-202ENST00000361309 FBXL16Q8N461 479 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 TBCKQ8TEA7 893 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 LPPQ93052 612 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 CEP89Q96ST8 783 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 SH2D3AQ9BRG2 576 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 FDXACB1Q9BRP7 624 aaPredicted RBP23.76■■□□□ 1.39
CD47-202ENST00000361309 AGXT2Q9BYV1 514 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 ZBP1Q9H171 429 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 SORCS3Q9UPU3 1222 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 DENND4AQ7Z401 1863 aa23.76■■□□□ 1.39
CD47-202ENST00000361309 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.75■■□□□ 1.39
CD47-202ENST00000361309 STBD1O95210 358 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 BRD1O95696 1058 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 RPS6KB1P23443 525 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 HSPA4P34932 840 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 MTHFRP42898 656 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 NLRP5P59047 1200 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 CCT2P78371 535 aaKnown RBP23.75■■□□□ 1.39
CD47-202ENST00000361309 CDC42EP1Q00587 391 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 XKR3Q5GH77 459 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 TWF2Q6IBS0 349 aaKnown RBP23.75■■□□□ 1.39
CD47-202ENST00000361309 KANK3Q6NY19 840 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 UBALD2Q8IYN6 164 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 C12orf76Q8N812 135 aaPredicted RBP23.75■■□□□ 1.39
CD47-202ENST00000361309 RDM1Q8NG50 284 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 AUTS2Q8WXX7 1259 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 ATOH1Q92858 354 aaPredicted RBP23.75■■□□□ 1.39
CD47-202ENST00000361309 NCOA5Q9HCD5 579 aaKnown RBP23.75■■□□□ 1.39
CD47-202ENST00000361309 SH3GLB2Q9NR46 395 aa23.75■■□□□ 1.39
CD47-202ENST00000361309 C2orf16Q68DN1 1984 aa23.74■■□□□ 1.39
CD47-202ENST00000361309 IGKV6-21A0A0C4DH24 114 aa23.74■■□□□ 1.39
CD47-202ENST00000361309 ST18O60284 1047 aa23.74■■□□□ 1.39
CD47-202ENST00000361309 SFPQP23246 707 aaKnown RBP eCLIP23.74■■□□□ 1.39
CD47-202ENST00000361309 DNM2P50570 870 aa23.74■■□□□ 1.39
CD47-202ENST00000361309 Q4G0T1 1027 aa23.74■■□□□ 1.39
CD47-202ENST00000361309 CENPQQ7L2Z9 268 aaPredicted RBP23.74■■□□□ 1.39
CD47-202ENST00000361309 TMEM87AQ8NBN3 555 aa23.74■■□□□ 1.39
CD47-202ENST00000361309 TRAIPQ9BWF2 469 aa23.74■■□□□ 1.39
CD47-202ENST00000361309 IRF2BPLQ9H1B7 796 aa23.74■■□□□ 1.39
CD47-202ENST00000361309 SMOC2Q9H3U7 446 aa23.74■■□□□ 1.39
CD47-202ENST00000361309 MYO15AQ9UKN7 3530 aa23.73■■□□□ 1.39
CD47-202ENST00000361309 H0Y858 1186 aa23.73■■□□□ 1.39
CD47-202ENST00000361309 TDP2O95551 362 aa23.73■■□□□ 1.39
CD47-202ENST00000361309 EPCAMP16422 314 aa23.73■■□□□ 1.39
CD47-202ENST00000361309 PDIA3P30101 505 aaKnown RBP23.73■■□□□ 1.39
CD47-202ENST00000361309 RHPN2Q8IUC4 686 aa23.73■■□□□ 1.39
CD47-202ENST00000361309 IGSF21Q96ID5 467 aa23.73■■□□□ 1.39
CD47-202ENST00000361309 NRDE2Q9H7Z3 1164 aa23.73■■□□□ 1.39
CD47-202ENST00000361309 TBC1D13Q9NVG8 400 aa23.73■■□□□ 1.39
CD47-202ENST00000361309 DZANK1Q9NVP4 752 aa23.73■■□□□ 1.39
CD47-202ENST00000361309 SUCLA2Q9P2R7 463 aaPredicted RBP23.73■■□□□ 1.39
CD47-202ENST00000361309 PIN4Q9Y237 131 aaKnown RBP23.73■■□□□ 1.39
CD47-202ENST00000361309 INPP5FQ9Y2H2 1132 aa23.73■■□□□ 1.39
CD47-202ENST00000361309 MEIS3P2A8K0S8 358 aa23.72■■□□□ 1.39
CD47-202ENST00000361309 DDX11L8A8MPP1 907 aa23.72■■□□□ 1.39
CD47-202ENST00000361309 GFRA3O60609 400 aa23.72■■□□□ 1.39
CD47-202ENST00000361309 CTSAP10619 480 aa23.72■■□□□ 1.39
CD47-202ENST00000361309 SKIP12755 728 aa23.72■■□□□ 1.39
CD47-202ENST00000361309 POLGP54098 1239 aaPredicted RBP23.72■■□□□ 1.39
CD47-202ENST00000361309 KIAA1841Q6NSI8 718 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms