RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SFR1Q86XK3 245 aa15.19■□□□□ 0.02
CSNK1E-201ENST00000359867 DNAJC5GQ8N7S2 189 aa15.19■□□□□ 0.02
CSNK1E-201ENST00000359867 SAGE1Q9NXZ1 904 aa15.19■□□□□ 0.02
CSNK1E-201ENST00000359867 TRAF3IP3Q9Y228 551 aa15.19■□□□□ 0.02
CSNK1E-201ENST00000359867 SAMM50Q9Y512 469 aa15.19■□□□□ 0.02
CSNK1E-201ENST00000359867 ADCYAP1R1P41586 468 aa15.19■□□□□ 0.02
CSNK1E-201ENST00000359867 TAPT1Q6NXT6 567 aa15.19■□□□□ 0.02
CSNK1E-201ENST00000359867 MIER3Q7Z3K6 550 aa15.19■□□□□ 0.02
CSNK1E-201ENST00000359867 GPATCH11Q8N954 259 aa15.19■□□□□ 0.02
CSNK1E-201ENST00000359867 PIGOQ8TEQ8 1089 aa15.19■□□□□ 0.02
CSNK1E-201ENST00000359867 MYCBPQ99417 103 aaPredicted RBP15.19■□□□□ 0.02
CSNK1E-201ENST00000359867 SEL1LQ9UBV2 794 aa15.19■□□□□ 0.02
CSNK1E-201ENST00000359867 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 MYO1CO00159 1063 aa15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 P4HBP07237 508 aaKnown RBP15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 TRIM21P19474 475 aaKnown RBP15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 ZBED6P86452 979 aa15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 KNOP1Q1ED39 458 aaKnown RBP15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 NELFCDQ8IXH7 590 aa15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 JPH1Q9HDC5 661 aaPredicted RBP15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 ODF2LQ9ULJ1 636 aa15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 SYNGAP1Q96PV0 1343 aa15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 PDXKO00764 312 aa15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 FKTNO75072 461 aa15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 GGPS1O95749 300 aa15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 TXNP10599 105 aaKnown RBP15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 FAM193AP78312 1265 aa15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 SMC1AQ14683 1233 aaKnown RBP15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 RSRC2Q7L4I2 434 aaKnown RBP15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 GPR161Q8N6U8 529 aaKnown RBP15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 TRIB2Q92519 343 aa15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 NCAPGQ9BPX3 1015 aa15.18■□□□□ 0.02
CSNK1E-201ENST00000359867 CETN3O15182 167 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 EIF3DO15371 548 aaKnown RBP eCLIP15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 CALUO43852 315 aaPredicted RBP15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 FAM13AO94988 1023 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 ACVR2BQ13705 512 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 MEA1Q16626 185 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 CCDC40Q4G0X9 1142 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 TRMT1LQ7Z2T5 733 aaKnown RBP15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 BANK1Q8NDB2 785 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 PCMTD1Q96MG8 357 aaPredicted RBP15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 LXNQ9BS40 222 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 ABHD16BQ9H3Z7 469 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 VTA1Q9NP79 307 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 SLC9A2Q9UBY0 812 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 SIK3Q9Y2K2 1263 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 ADCY6O43306 1168 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 LYPLA2O95372 231 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 ELNP15502 786 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 CCDC62Q6P9F0 684 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 SCFD2Q8WU76 684 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 ARFGAP3Q9NP61 516 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 WBP1LQ9NX94 342 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 WRAP73Q9P2S5 460 aaPredicted RBP15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 TCEAL9Q9UHQ7 104 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 FAM184BQ9ULE4 1060 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 LOXHD1Q8IVV2 1947 aa15.17■□□□□ 0.02
CSNK1E-201ENST00000359867 FARP2O94887 1054 aaPredicted RBP15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 ABL1P00519 1130 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 GUCY2CP25092 1073 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 ZNF131P52739 623 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 TRIM32Q13049 653 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 ADAM9Q13443 819 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 TTLL4Q14679 1199 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 GOLGA1Q92805 767 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 LENG1Q96BZ8 264 aaPredicted RBP15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 SENP7Q9BQF6 1050 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 EDEM3Q9BZQ6 932 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 TYW1Q9NV66 732 aaKnown RBP15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 ZNHIT6Q9NWK9 470 aaKnown RBP15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 SRRDQ9UH36 339 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 DBR1Q9UK59 544 aaKnown RBP15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 NFASCO94856 1347 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 RSPH10B2B2RC85 870 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 RSPH10BP0C881 870 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 TGFB3P10600 412 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 CASP5P51878 434 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 CDK17Q00537 523 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 KRT76Q01546 638 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 OLFML2BQ68BL8 750 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 PARVGQ9HBI0 331 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 UBE4BO95155 1302 aa15.16■□□□□ 0.02
CSNK1E-201ENST00000359867 ARHGEF35A5YM69 484 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 NKRFO15226 690 aaKnown RBP eCLIP15.15■□□□□ 0.027e-9■■■□□ 16.7
CSNK1E-201ENST00000359867 ACTR2P61160 394 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 HSDL1Q3SXM5 330 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 STXBP4Q6ZWJ1 553 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 TRIM59Q8IWR1 403 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 MSL3Q8N5Y2 521 aaKnown RBP15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 FUT8Q9BYC5 575 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 MLXIPQ9HAP2 919 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 WDR64B1ANS9 1081 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 H3BQF6 201 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 ZBTB39O15060 712 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 GCNT3O95395 438 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 MYBP10242 640 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 XRCC5P13010 732 aaKnown RBP15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 RPL13P26373 211 aaKnown RBP15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 SFNP31947 248 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms