RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 DNAJB3Q8WWF6 145 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 BSNDQ8WZ55 320 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 DHX38Q92620 1227 aaKnown RBP13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 ERCC4Q92889 916 aaPredicted RBP13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 WNT8BQ93098 351 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 SYAP1Q96A49 352 aaPredicted RBP13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 MAP7D2Q96T17 732 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 PARVGQ9HBI0 331 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 DNAH12Q6ZR08 3092 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 CDC42EP1Q00587 391 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 TLE2Q04725 743 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 LAMTOR4Q0VGL1 99 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 COASYQ13057 564 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 TRIM60Q495X7 471 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 KMT5BQ4FZB7 885 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 HERC4Q5GLZ8 1057 aaPredicted RBP13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 MYCT1Q8N699 235 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 SPIRE2Q8WWL2 714 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 SMARCE1Q969G3 411 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 FIZ1Q96SL8 496 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 FAM49AQ9H0Q0 323 aaPredicted RBP13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 PRO3102Q9H379 93 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 LARSQ9P2J5 1176 aaKnown RBP13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 SEL1LQ9UBV2 794 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 KCNG1Q9UIX4 513 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 NOD1Q9Y239 953 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 DCDC2CA8MYV0 355 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 TLR3O15455 904 aaKnown RBP13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 PQBP1O60828 265 aaKnown RBP13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 RHOBTB3O94955 611 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 VTNP04004 478 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 MAPTP10636 758 aaKnown RBP13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 PEX3P56589 373 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 POU5F1BQ06416 359 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 PSMD2Q13200 908 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 PPP2R5AQ15172 486 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 ODR4Q5SWX8 454 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 RSPH3Q86UC2 560 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 SFR1Q86XK3 245 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 RHPN2Q8IUC4 686 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 KSR1Q8IVT5 923 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 IFT74Q96LB3 600 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 ADAMTS10Q9H324 1103 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 ZHX3Q9H4I2 956 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 OLFML3Q9NRN5 406 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 AKT3Q9Y243 479 aa13.71□□□□□ -0.22
NIF3L1-201ENST00000359683 MYH11P35749 1972 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 CAND2O75155 1236 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 GPR32O75388 356 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 NAMPTP43490 491 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 NPTX2P47972 431 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 GPC3P51654 580 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 RBL2Q08999 1139 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 FAAP100Q0VG06 881 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 CAPSQ13938 189 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 FAM26DQ5JW98 314 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 C7orf61Q8IZ16 206 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 KCNN1Q92952 543 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 CCDC47Q96A33 483 aaKnown RBP13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 RMND1Q9NWS8 449 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 MAN1B1Q9UKM7 699 aa13.7□□□□□ -0.22
NIF3L1-201ENST00000359683 SRGAP2CP0DJJ0 459 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 NCKAP1LP55160 1127 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 NLRP11P59045 1033 aaKnown RBP13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 PTENP60484 403 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 MRPS6P82932 125 aaKnown RBP13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 DMP1Q13316 513 aaPredicted RBP13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 TFDP1Q14186 410 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 ZNF720Q7Z2F6 126 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 ZNF410Q86VK4 478 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 IFNLR1Q8IU57 520 aaPredicted RBP13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 FAM178BQ8IXR5 827 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 RNF149Q8NC42 400 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 CAGE1Q8TC20 777 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 NFKBIZQ9BYH8 718 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 ST6GALNAC4Q9H4F1 302 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 IFT122Q9HBG6 1241 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 EXOC1Q9NV70 894 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 ATP11BQ9Y2G3 1177 aa13.69□□□□□ -0.22
NIF3L1-201ENST00000359683 CCDC169A6NNP5 214 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 LETM1O95202 739 aaPredicted RBP13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 CHRNA1P02708 482 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 CKBP12277 381 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 THPOP40225 353 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 CRYBB1P53674 252 aaPredicted RBP13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 SMTNP53814 917 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 MGAT3Q09327 533 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 TMEM62Q0P6H9 643 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 STK4Q13043 487 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 MORC3Q14149 939 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 FAM26FQ5R3K3 315 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 TRIML1Q8N9V2 468 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 SLC17A8Q8NDX2 589 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 TMEM161BQ8NDZ6 487 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 HPS3Q969F9 1004 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 STRA6Q9BX79 667 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 CELF4Q9BZC1 486 aaKnown RBP13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 GTPBP4Q9BZE4 634 aaKnown RBP13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 CDHR5Q9HBB8 845 aa13.68□□□□□ -0.22
NIF3L1-201ENST00000359683 KMT5AQ9NQR1 393 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms