RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 AKR1A1P14550 325 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 MAGEA10P43363 369 aaPredicted RBP15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 COPB1P53618 953 aaKnown RBP15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 RTP1P59025 263 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 FKBP3Q00688 224 aaKnown RBP15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 DMP1Q13316 513 aaPredicted RBP15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 KRT31Q15323 416 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 EDRF1Q3B7T1 1238 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 HS1BP3Q53T59 392 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 ZNF720Q7Z2F6 126 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 C7orf61Q8IZ16 206 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 PXYLP1Q8TE99 480 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 ATP8B4Q8TF62 1192 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 PAWRQ96IZ0 340 aaKnown RBP15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 CNOT6LQ96LI5 555 aaKnown RBP15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 CEP63Q96MT8 703 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 FIZ1Q96SL8 496 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 TYW1Q9NV66 732 aaKnown RBP15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 KCNG1Q9UIX4 513 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 MUC3AQ02505 3323 aa15.24■□□□□ 0.03
PDLIM5-203ENST00000359265 A0A1B0GTH6 734 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 PDXKO00764 312 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 ADCY3O60266 1144 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 LGALS2P05162 132 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 CYBAP13498 195 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 SMPD1P17405 629 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 SMTNP53814 917 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 PEX3P56589 373 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 TARBP2Q15633 366 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 TMEM63BQ5T3F8 832 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 GJC2Q5T442 439 aaPredicted RBP15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 LRRC55Q6ZSA7 311 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 APTXQ7Z2E3 356 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 TRIM50Q86XT4 487 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 EXOC8Q8IYI6 725 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 DIS3LQ8TF46 1054 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 AFG1LQ8WV93 481 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 SLC7A3Q8WY07 619 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 HVCN1Q96D96 273 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 FAM122AQ96E09 287 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 POLR3FQ9H1D9 316 aaPredicted RBP15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 ST6GALNAC4Q9H4F1 302 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 DHX33Q9H6R0 707 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 GPRC5CQ9NQ84 441 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 XPNPEP1Q9NQW7 623 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 PDLIM7Q9NR12 457 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 ERAP1Q9NZ08 941 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 IMPACTQ9P2X3 320 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 TRAF3IP3Q9Y228 551 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 Q9Y3F1 56 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 TTC28Q96AY4 2481 aa15.23■□□□□ 0.03
PDLIM5-203ENST00000359265 H0YCG3 227 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 GAS2O43903 313 aaKnown RBP15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 HBP1O60381 514 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 PPP1R37O75864 691 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 GNA14O95837 355 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 TFRCP02786 760 aaKnown RBP15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 MARK3P27448 753 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 ABCD1P33897 745 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 MTIF2P46199 727 aaKnown RBP15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 NCKAP1LP55160 1127 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 PLCB4Q15147 1175 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 BRDTQ58F21 947 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 PRAMEF19Q5SWL8 479 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 HS2ST1Q7LGA3 356 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 IRF2BP1Q8IU81 584 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 CREBRFQ8IUR6 639 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 ZC3H3Q8IXZ2 948 aaKnown RBP15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 SLAIN1Q8ND83 568 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 GOLGA5Q8TBA6 731 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 SPIRE2Q8WWL2 714 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 IFT74Q96LB3 600 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 NAP1L5Q96NT1 182 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 JPH2Q9BR39 696 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 TAB2Q9NYJ8 693 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 ZNF215Q9UL58 517 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 TRPC6Q9Y210 931 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 ZMYM2Q9UBW7 1377 aa15.22■□□□□ 0.03
PDLIM5-203ENST00000359265 LRRC10BA6NIK2 292 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 N4BP3O15049 544 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 CETN3O15182 167 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 MMP3P08254 477 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 HOXD8P13378 290 aaPredicted RBP15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 RPL13P26373 211 aaKnown RBP15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 HOXD13P35453 343 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 TBC1D8BQ0IIM8 1120 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 NR1I3Q14994 352 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 PPP2R5AQ15172 486 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 NFIL3Q16649 462 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 ZC2HC1CQ53FD0 456 aaPredicted RBP15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 TMC6Q7Z403 805 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 HAUS6Q7Z4H7 955 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 TLK2Q86UE8 772 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 VSTM4Q8IW00 320 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 ACCSQ96QU6 501 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 CEP89Q96ST8 783 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 STRA6Q9BX79 667 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 AP5M1Q9H0R1 490 aa15.21■□□□□ 0.03
PDLIM5-203ENST00000359265 TMEM206Q9H813 350 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms