RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 PLS1Q14651 629 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 PPP2R5AQ15172 486 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 UAP1Q16222 522 aaPredicted RBP9.33□□□□□ -0.92
RFX3-202ENST00000358730 TTC31Q49AM3 519 aaPredicted RBP9.33□□□□□ -0.92
RFX3-202ENST00000358730 NAA35Q5VZE5 725 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 RDH13Q8NBN7 331 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 OR2W6PQ8NHA6 318 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 CCDC26Q8TAB7 109 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 UBLCP1Q8WVY7 318 aaPredicted RBP9.33□□□□□ -0.92
RFX3-202ENST00000358730 QTRT2Q9H974 415 aaKnown RBP9.33□□□□□ -0.92
RFX3-202ENST00000358730 TMOD2Q9NZR1 351 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 KCND2Q9NZV8 630 aa9.33□□□□□ -0.92
RFX3-202ENST00000358730 HERC5Q9UII4 1024 aaKnown RBP9.33□□□□□ -0.92
RFX3-202ENST00000358730 CLRN2A0PK11 232 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 K7ENM7 598 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 DDX39AO00148 427 aaKnown RBP9.32□□□□□ -0.92
RFX3-202ENST00000358730 HIP1RO75146 1068 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 CCDC172P0C7W6 258 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 ARP10275 920 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 SETQ01105 290 aaPredicted RBP9.32□□□□□ -0.92
RFX3-202ENST00000358730 LRIG3Q6UXM1 1119 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 TADA2BQ86TJ2 420 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 TEKT3Q9BXF9 490 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 CELF4Q9BZC1 486 aaKnown RBP9.32□□□□□ -0.92
RFX3-202ENST00000358730 PPP1R9AQ9ULJ8 1098 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 TMX2Q9Y320 296 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 H0YIN7 160 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 IPO5O00410 1097 aaKnown RBP9.32□□□□□ -0.92
RFX3-202ENST00000358730 VIL1P09327 827 aaKnown RBP9.32□□□□□ -0.92
RFX3-202ENST00000358730 ITGB3BPQ13352 177 aaPredicted RBP9.32□□□□□ -0.92
RFX3-202ENST00000358730 MAEAQ7L5Y9 396 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 PALB2Q86YC2 1186 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 FMNL3Q8IVF7 1028 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 C1orf131Q8NDD1 294 aaKnown RBP9.32□□□□□ -0.92
RFX3-202ENST00000358730 AKT1S1Q96B36 256 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 ARHGEF26Q96DR7 871 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 HOOK2Q96ED9 719 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 SYT11Q9BT88 431 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 THAP2Q9H0W7 228 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 DPH5Q9H2P9 285 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 RANBP17Q9H2T7 1088 aaKnown RBP9.32□□□□□ -0.92
RFX3-202ENST00000358730 TMBIM4Q9HC24 238 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 DMAC2Q9NW81 257 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 TAS2R14Q9NYV8 317 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 PKD2L1Q9P0L9 805 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.32□□□□□ -0.92
RFX3-202ENST00000358730 ZBTB21Q9ULJ3 1066 aa9.32□□□□□ -0.92
RFX3-202ENST00000358730 UTP11Q9Y3A2 253 aaKnown RBP9.32□□□□□ -0.92
RFX3-202ENST00000358730 MRPL11Q9Y3B7 192 aaKnown RBP9.32□□□□□ -0.92
RFX3-202ENST00000358730 PPP1R37O75864 691 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 TNFAIP3P21580 790 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 MUTP22033 750 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 FLT3P36888 993 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 ZNF844Q08AG5 666 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 MTMR3Q13615 1198 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 DCAF12L1Q5VU92 463 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 ADAT2Q7Z6V5 191 aaKnown RBP9.31□□□□□ -0.92
RFX3-202ENST00000358730 TEX2Q8IWB9 1127 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 TRIM51Q9BSJ1 452 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 TRIM31Q9BZY9 425 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 BCS1LQ9Y276 419 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 A0A087WUV0 522 aaPredicted RBP9.31□□□□□ -0.92
RFX3-202ENST00000358730 BHMG1C9JSJ3 638 aaPredicted RBP9.31□□□□□ -0.92
RFX3-202ENST00000358730 KRT13P13646 458 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 GUCY2CP25092 1073 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 HMGB2P26583 209 aaKnown RBP9.31□□□□□ -0.92
RFX3-202ENST00000358730 CHRNA5P30532 468 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 MDH1P40925 334 aaKnown RBP9.31□□□□□ -0.92
RFX3-202ENST00000358730 LIG3P49916 1009 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 PPATQ06203 517 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 MAPK7Q13164 816 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 STYK1Q6J9G0 422 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 PHLDB3Q6NSJ2 640 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 PACS2Q86VP3 889 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 MICALL1Q8N3F8 863 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 CHURC1Q8WUH1 139 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 EPN3Q9H201 632 aa9.31□□□□□ -0.92
RFX3-202ENST00000358730 H0YGN5 161 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 DDX3YO15523 660 aaKnown RBP9.3□□□□□ -0.92
RFX3-202ENST00000358730 RFX1P22670 979 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 ZNF211Q13398 564 aaPredicted RBP9.3□□□□□ -0.92
RFX3-202ENST00000358730 PTGISQ16647 500 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 EMC10Q5UCC4 262 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 B4GALNT4Q76KP1 1039 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 TMC3Q7Z5M5 1100 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 DAW1Q8N136 415 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 SLC20A1Q8WUM9 679 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 CARD9Q9H257 536 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 PCIF1Q9H4Z3 704 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 FAM114A2Q9NRY5 505 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 FBXO28Q9NVF7 368 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 BCCIPQ9P287 314 aaKnown RBP eCLIP9.3□□□□□ -0.92
RFX3-202ENST00000358730 NR2E1Q9Y466 385 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 NFS1Q9Y697 457 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 GOLGA6L10A0A0M3HER8 536 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 ANKRD62A6NC57 917 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 YDJCA8MPS7 323 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 TISP43B9A030 160 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 MYO1FO00160 1098 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 FOXN3O00409 490 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms