RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SEPT10Q9P0V9 454 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 R3HDM2Q9Y2K5 976 aaKnown RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 EIF4A1P60842 406 aaKnown RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 MMADHCQ9H3L0 296 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 PKD2L2Q9NZM6 624 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 AIPL1Q9NZN9 384 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 HMGXB3Q12766 1538 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 KRT4P19013 534 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 CDC25AP30304 524 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 ECE1P42892 770 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 RINT1Q6NUQ1 792 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 FAM43BQ6ZT52 329 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 BARGINQ6ZT62 677 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 TATDN2Q93075 761 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 UNC45AQ9H3U1 944 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 TRIM33Q9UPN9 1127 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 A0A1W2PQC6 194 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 IL1RL1Q01638 556 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 HIC1Q14526 733 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 LRRC41Q15345 812 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 LONRF1Q17RB8 773 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 BTNL9Q6UXG8 535 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 TPH2Q8IWU9 490 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 FUKQ8N0W3 1084 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 GIPC2Q8TF65 315 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 PRCCQ92733 491 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 RANBP17Q9H2T7 1088 aaKnown RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 COPRSQ9NQ92 184 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 AMACRQ9UHK6 382 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 TNKSO95271 1327 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 K7ENM7 598 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 ARPP21Q9UBL0 812 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 COPB2P35606 906 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 KIAA1755Q5JYT7 1200 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 CCDC125Q86Z20 511 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 MB21D2Q8IYB1 491 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 ATP11CQ8NB49 1132 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 OXER1Q8TDS5 423 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 SLC26A7Q8TE54 656 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 CTTNBP2Q8WZ74 1663 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 NT5C1BQ96P26 610 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 ADGRL3Q9HAR2 1447 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 TUBA8Q9NY65 449 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 ESYT2A0FGR8 921 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 CLPTM1O96005 669 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 TECP42680 631 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 CMTR1Q8N1G2 835 aaKnown RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 TRAPPC3O43617 180 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 DLATP10515 647 aaKnown RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 PTPN4P29074 926 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 PPIDQ08752 370 aaKnown RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 EZH1Q92800 747 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 GINM1Q9NU53 330 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 GGA2Q9UJY4 613 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 ACACAQ13085 2346 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 NLRP1Q9C000 1473 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 CPSF1Q10570 1443 aaKnown RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 SMCO2A6NFE2 343 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 TBKBP1A7MCY6 615 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 GYPCP04921 128 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 DAB2P98082 770 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 NCAPHQ15003 741 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 ZNF554Q86TJ5 538 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 NPHS2Q9NP85 383 aa6.47□□□□□ -1.37
VPS13B-203ENST00000358544 DNMT1P26358 1616 aaKnown RBP6.47□□□□□ -1.37
VPS13B-203ENST00000358544 COL6A6A6NMZ7 2263 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 TOM1O60784 492 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 HOXC9P31274 260 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 KYNUQ16719 465 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 USP38Q8NB14 1042 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 POLR3CQ9BUI4 534 aaPredicted RBP6.46□□□□□ -1.37
VPS13B-203ENST00000358544 PHF23Q9BUL5 403 aaPredicted RBP6.46□□□□□ -1.37
VPS13B-203ENST00000358544 CCDC28BQ9BUN5 200 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 UBE2TQ9NPD8 197 aaPredicted RBP6.46□□□□□ -1.37
VPS13B-203ENST00000358544 DLGAP3O95886 979 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 ERVK-24P63145 666 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 ARL6IP4Q66PJ3 421 aaKnown RBP6.46□□□□□ -1.37
VPS13B-203ENST00000358544 CNBD1Q8NA66 436 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 GDPD5Q8WTR4 605 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 EHD4Q9H223 541 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 DISC1Q9NRI5 854 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 ABLIM1O14639 778 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 PRPF3O43395 683 aaKnown RBP6.46□□□□□ -1.37
VPS13B-203ENST00000358544 KPNA2P52292 529 aaKnown RBP6.46□□□□□ -1.37
VPS13B-203ENST00000358544 ZNF211Q13398 564 aaPredicted RBP6.46□□□□□ -1.37
VPS13B-203ENST00000358544 KCTD21Q4G0X4 260 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 TMC5Q6UXY8 1006 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 MARK2Q7KZI7 788 aaKnown RBP6.46□□□□□ -1.37
VPS13B-203ENST00000358544 SLC17A8Q8NDX2 589 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 PAWRQ96IZ0 340 aaKnown RBP6.46□□□□□ -1.37
VPS13B-203ENST00000358544 CYP4F11Q9HBI6 524 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 ATP8A2Q9NTI2 1148 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 ADGBQ8N7X0 1667 aa6.46□□□□□ -1.37
VPS13B-203ENST00000358544 URB2Q14146 1524 aaKnown RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 B2RBV5 119 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 PRAMEP78395 509 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 RAB44Q7Z6P3 723 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 RFFLQ8WZ73 363 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 ZFRQ96KR1 1074 aaKnown RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 RNPEPL1Q9HAU8 725 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms