RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 MLH3Q9UHC1 1453 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 SNAPC5O75971 98 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 FGAP02671 866 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 TKTP29401 623 aaKnown RBP6.99□□□□□ -1.29
VPS13B-202ENST00000357162 ARL4AP40617 200 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 SUPT20HQ8NEM7 779 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 ACCSQ96QU6 501 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 AMNQ9BXJ7 453 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 PSMC3IPQ9P2W1 217 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-202ENST00000357162 MAP3K19Q56UN5 1328 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 HECW2Q9P2P5 1572 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 PNMA6EA0A0J9YXQ4 647 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 FAM177BA6PVY3 158 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 TNNC2P02585 160 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 RGS2P41220 211 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 RAD23BP54727 409 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 SPATA21Q7Z572 469 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 DDHD1Q8NEL9 900 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 MBD2Q9UBB5 411 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 DCDC2Q9UHG0 476 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 ZNF532Q9HCE3 1301 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 RASSF9O75901 435 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 TAB1Q15750 504 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 STAG2Q8N3U4 1231 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 EFHBQ8N7U6 833 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 CNBD2Q96M20 576 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 KANSL2Q9H9L4 492 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 MAN1B1Q9UKM7 699 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 TNNI1P19237 187 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 NPEPPSP55786 919 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 EPS8Q12929 822 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 GSTA3Q16772 222 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 NAA35Q5VZE5 725 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 FAM227BQ96M60 508 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 VPS33BQ9H267 617 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 SERTAD1Q9UHV2 236 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 ITGA6P23229 1130 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 RFC4P35249 363 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 TCIRG1Q13488 830 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 RAB21Q9UL25 225 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 AFG3L2Q9Y4W6 797 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS13B-202ENST00000357162 WNK1Q9H4A3 2382 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 CTSWP56202 376 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 HIF1AQ16665 826 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 FBXL13Q8NEE6 735 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 CDC42BPGQ6DT37 1551 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 RXRGP48443 463 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 NECTIN1Q15223 517 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 CYFIP2Q96F07 1278 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 MAP3K4Q9Y6R4 1608 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 KATNA1O75449 491 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 FLOT2Q14254 428 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 CDR2LQ86X02 465 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-202ENST00000357162 ZC3H12CQ9C0D7 883 aaKnown RBP6.99□□□□□ -1.29
VPS13B-202ENST00000357162 TRMT44Q8IYL2 757 aaKnown RBP6.99□□□□□ -1.29
VPS13B-202ENST00000357162 GIMAP8Q8ND71 665 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-202ENST00000357162 NAV3Q8IVL0 2385 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 MYH13Q9UKX3 1938 aa6.99□□□□□ -1.29
VPS13B-202ENST00000357162 ZBED4O75132 1171 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 SRGAP2CP0DJJ0 459 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 C16orf71Q8IYS4 520 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 ERGIC2Q96RQ1 377 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 NUP205Q92621 2012 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 CDC27P30260 824 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 EIF4A1P60842 406 aaKnown RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 CNGA2Q16280 664 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 WASHC2DQ5SRD0 308 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 OSBPL8Q9BZF1 889 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 TUBE1Q9UJT0 475 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 KIF20BQ96Q89 1820 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 ACSL3O95573 720 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PDCLQ13371 301 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 SCFD1Q8WVM8 642 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 TIMMDC1Q9NPL8 285 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 SMIM31A0A1B0GVY4 71 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 TBC1D4O60343 1298 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 RUNX1T1Q06455 604 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 CWF19L2Q2TBE0 894 aaKnown RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 SLC7A3Q8WY07 619 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 FAM167AQ96KS9 214 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 ATAD3AQ9NVI7 634 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 HNRNPDLO14979 420 aaKnown RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 CD19P15391 556 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 FAM83BQ5T0W9 1011 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PPM1KQ8N3J5 372 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 MB21D1Q8N884 522 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 MAP3K14Q99558 947 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 IQCB1Q15051 598 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 MCPH1Q8NEM0 835 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PAGE5Q96GU1 130 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 NR1H4Q96RI1 486 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 RANBP17Q9H2T7 1088 aaKnown RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PAPOLBQ9NRJ5 636 aaKnown RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 LRRC7Q96NW7 1537 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 PKP1Q13835 747 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 MIGA2Q7L4E1 593 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 TBC1D1Q86TI0 1168 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-202ENST00000357162 FBXL16Q8N461 479 aa6.98□□□□□ -1.29
VPS13B-202ENST00000357162 ZBTB38Q8NAP3 1195 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms