RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 CD2BP2O95400 341 aaKnown RBP17.12■□□□□ 0.33
RXRA-201ENST00000356384 TEKT4Q8WW24 435 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 FAM96AQ9H5X1 160 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 E5RI56 91 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 ATP5HO75947 161 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 RESTQ13127 1097 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 TTC13Q8NBP0 860 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 TMEM35BQ8NCS4 154 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 RNF25Q96BH1 459 aaPredicted RBP17.11■□□□□ 0.33
RXRA-201ENST00000356384 HPCAL4Q9UM19 191 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 MRFAP1Q9Y605 127 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 FAM161BQ96MY7 647 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 EGFL8Q99944 293 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 STOML1Q9UBI4 398 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 TMEM270Q6UE05 265 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 FAM160B2Q86V87 743 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 ASPSCR1Q9BZE9 553 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 CYP4F11Q9HBI6 524 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 MRPL40Q9NQ50 206 aaKnown RBP17.11■□□□□ 0.33
RXRA-201ENST00000356384 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.11■□□□□ 0.332e-6■■■■■ 55.4
RXRA-201ENST00000356384 KDM5AP29375 1690 aaKnown RBP17.11■□□□□ 0.33
RXRA-201ENST00000356384 SHROOM2Q13796 1616 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 MIF4GDA9UHW6 222 aaKnown RBP17.11■□□□□ 0.33
RXRA-201ENST00000356384 STK25O00506 426 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 CHGBP05060 677 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 PMS1P54277 932 aaKnown RBP17.11■□□□□ 0.33
RXRA-201ENST00000356384 VCPP55072 806 aaKnown RBP17.11■□□□□ 0.33
RXRA-201ENST00000356384 DONSONQ9NYP3 566 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 AFF4Q9UHB7 1163 aaKnown RBP17.11■□□□□ 0.33
RXRA-201ENST00000356384 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
RXRA-201ENST00000356384 GGCXP38435 758 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 GCLMP48507 274 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 GPC5P78333 572 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 ANO4Q32M45 955 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 FAM167BQ9BTA0 163 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 CASS4Q9NQ75 786 aa17.11■□□□□ 0.33
RXRA-201ENST00000356384 LARGE1O95461 756 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 SMARCA1P28370 1054 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 PCYT1AP49585 367 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 ZNF699Q32M78 642 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 RASSF3Q86WH2 238 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 C11orf70Q9BRQ4 267 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 PLEKHA8P1O95397 391 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 PMS2P54278 862 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 GFPT1Q06210 699 aaPredicted RBP17.1■□□□□ 0.33
RXRA-201ENST00000356384 ARID5BQ14865 1188 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 LRRC31Q6UY01 552 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 GPR101Q96P66 508 aaPredicted RBP17.1■□□□□ 0.33
RXRA-201ENST00000356384 CEP72Q9P209 647 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 PCSK1NQ9UHG2 260 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 CLDN3O15551 220 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 SLC10A5Q5PT55 438 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 TADA2BQ86TJ2 420 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 ARHGEF25Q86VW2 580 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 MTBPQ96DY7 904 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 PTPRTO14522 1441 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 KRT4P19013 534 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 HOXA7P31268 230 aaPredicted RBP17.1■□□□□ 0.33
RXRA-201ENST00000356384 NR1H3Q13133 447 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 ZNF211Q13398 564 aaPredicted RBP17.1■□□□□ 0.33
RXRA-201ENST00000356384 PDXDC1Q6P996 788 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 ZBED2Q9BTP6 218 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 SPATA31E1Q6ZUB1 1445 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 UBE4BO95155 1302 aa17.1■□□□□ 0.33
RXRA-201ENST00000356384 TRIM49BA6NDI0 452 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 KCNA4P22459 653 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 CDK8P49336 464 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 AP2B1P63010 937 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 ARL6IP4Q66PJ3 421 aaKnown RBP17.09■□□□□ 0.33
RXRA-201ENST00000356384 TTLL11Q8NHH1 800 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 LRRC37BQ96QE4 947 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 TRIM45Q9H8W5 580 aaPredicted RBP17.09■□□□□ 0.33
RXRA-201ENST00000356384 PRDM15P57071 1507 aaPredicted RBP17.09■□□□□ 0.33
RXRA-201ENST00000356384 E9PMD0 336 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 NEK2P51955 445 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 ARFIP2P53365 341 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 ELMSAN1Q6PJG2 1045 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 RNF135Q8IUD6 432 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 SLC24A3Q9HC58 644 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 LRRC53A6NM62 1247 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 DCAF4L1Q3SXM0 396 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 MAGEB5Q9BZ81 275 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 SLC13A1Q9BZW2 595 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 ATP6V0A4Q9HBG4 840 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 RC3H1Q5TC82 1133 aaKnown RBP17.09■□□□□ 0.33
RXRA-201ENST00000356384 SAAL1Q96ER3 474 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 MAGEA9P43362 315 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 MMS22LQ6ZRQ5 1243 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 RFX8Q6ZV50 586 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 SFR1Q86XK3 245 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 ZNF341Q9BYN7 854 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 CYP26B1Q9NR63 512 aa17.09■□□□□ 0.33
RXRA-201ENST00000356384 PSMC1P62191 440 aaKnown RBP17.08■□□□□ 0.33
RXRA-201ENST00000356384 RBBP7Q16576 425 aa17.08■□□□□ 0.33
RXRA-201ENST00000356384 UNC13DQ70J99 1090 aa17.08■□□□□ 0.33
RXRA-201ENST00000356384 PATL1Q86TB9 770 aaKnown RBP17.08■□□□□ 0.33
RXRA-201ENST00000356384 TGS1Q96RS0 853 aaKnown RBP17.08■□□□□ 0.33
RXRA-201ENST00000356384 MYOM2P54296 1465 aa17.08■□□□□ 0.33
RXRA-201ENST00000356384 HUS1O60921 280 aa17.08■□□□□ 0.33
RXRA-201ENST00000356384 CALB1P05937 261 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms