RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ZBTB38Q8NAP3 1195 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-201ENST00000356083 NEURL1BA8MQ27 555 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 TRIM32Q13049 653 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 ST13P4Q8IZP2 240 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-201ENST00000356083 GREM2Q9H772 168 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 ZHX2Q9Y6X8 837 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 USP17L3A6NCW0 530 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 USP17L4A6NCW7 530 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 ADORA1P30542 326 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 SOAT1P35610 550 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 USP17L1Q7RTZ2 530 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 PPP2R3CQ969Q6 453 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 IQGAP2Q13576 1575 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 CCDC78A2IDD5 438 aa18.35■□□□□ 0.53
COL27A1-201ENST00000356083 PRXQ9BXM0 1461 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 GFAPP14136 432 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 DIS3LQ8TF46 1054 aaKnown RBP18.34■□□□□ 0.53
COL27A1-201ENST00000356083 ATP11BQ9Y2G3 1177 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 LRRC24Q50LG9 513 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 SGO1Q5FBB7 561 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 MDH1BQ5I0G3 518 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 C1orf146Q5VVC0 180 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 MUC3BQ9H195 1237 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 DARSP14868 501 aaKnown RBP18.34■□□□□ 0.53
COL27A1-201ENST00000356083 RAD51Q06609 339 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 NUGGCQ68CJ6 796 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 ALKBH2Q6NS38 261 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 AGAP3Q96P47 875 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 TMEM245Q9H330 911 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 FAM32AQ9Y421 112 aaKnown RBP18.34■□□□□ 0.53
COL27A1-201ENST00000356083 CAPN15O75808 1086 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 HMOX2P30519 316 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 MAPK6Q16659 721 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 MFSD14CQ5VZR4 134 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 TRIM69Q86WT6 500 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 WDR75Q8IWA0 830 aaKnown RBP18.34■□□□□ 0.53
COL27A1-201ENST00000356083 ZNF274Q96GC6 653 aaPredicted RBP18.34■□□□□ 0.53
COL27A1-201ENST00000356083 ZMYND12Q9H0C1 365 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 MID2Q9UJV3 735 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 LZTS3O60299 673 aaPredicted RBP18.34■□□□□ 0.53
COL27A1-201ENST00000356083 LRRC8AQ8IWT6 810 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 ARHGEF3Q9NR81 526 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 NOVA2Q9UNW9 492 aaKnown RBP18.34■□□□□ 0.53
COL27A1-201ENST00000356083 MYO1GB0I1T2 1018 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 ZNF197O14709 1029 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 CACNB3P54284 484 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 ACAP3Q96P50 834 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 BCL2L14Q9BZR8 327 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 POLD4Q9HCU8 107 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 KCNH4Q9UQ05 1017 aa18.34■□□□□ 0.53
COL27A1-201ENST00000356083 ZNF235Q14590 738 aa18.33■□□□□ 0.53
COL27A1-201ENST00000356083 BEST2Q8NFU1 509 aa18.33■□□□□ 0.53
COL27A1-201ENST00000356083 MAP3K20Q9NYL2 800 aaKnown RBP18.33■□□□□ 0.53
COL27A1-201ENST00000356083 SLC25A13Q9UJS0 675 aa18.33■□□□□ 0.53
COL27A1-201ENST00000356083 CAB39Q9Y376 341 aaPredicted RBP18.33■□□□□ 0.53
COL27A1-201ENST00000356083 CYBBP04839 570 aa18.33■□□□□ 0.53
COL27A1-201ENST00000356083 ALDH6A1Q02252 535 aaKnown RBP18.33■□□□□ 0.53
COL27A1-201ENST00000356083 MED21Q13503 144 aa18.33■□□□□ 0.53
COL27A1-201ENST00000356083 CEP78Q5JTW2 689 aa18.33■□□□□ 0.53
COL27A1-201ENST00000356083 TBC1D19Q8N5T2 526 aa18.33■□□□□ 0.53
COL27A1-201ENST00000356083 MAD2L2Q9UI95 211 aa18.33■□□□□ 0.53
COL27A1-201ENST00000356083 SERPINB13Q9UIV8 391 aa18.33■□□□□ 0.53
COL27A1-201ENST00000356083 ALDH1A2O94788 518 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 RBL2Q08999 1139 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 KIZQ2M2Z5 673 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 FOPNLQ96NB1 174 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 SPTLC3Q9NUV7 552 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 GUCA1AP43080 201 aaPredicted RBP18.33■□□□□ 0.52
COL27A1-201ENST00000356083 MAP3K10Q02779 954 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 ITPRIPL1Q6GPH6 555 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 COG1Q8WTW3 980 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 PGRMC1O00264 195 aaKnown RBP18.33■□□□□ 0.52
COL27A1-201ENST00000356083 SGSM2O43147 1006 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 SURF1Q15526 300 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 GJC2Q5T442 439 aaPredicted RBP18.33■□□□□ 0.52
COL27A1-201ENST00000356083 SPATA1Q5VX52 437 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 SYT2Q8N9I0 419 aaPredicted RBP18.33■□□□□ 0.52
COL27A1-201ENST00000356083 MYRIPQ8NFW9 859 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 PYGBP11216 843 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 PHKA1P46020 1223 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 NR5A1Q13285 461 aa18.33■□□□□ 0.52
COL27A1-201ENST00000356083 A0A087WWV3 80 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 IKBKBO14920 756 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 PI4KBQ9UBF8 816 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 P4HA2O15460 535 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 ATXN3P54252 364 aaPredicted RBP18.32■□□□□ 0.52
COL27A1-201ENST00000356083 NLGN1Q8N2Q7 840 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 XDHP47989 1333 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 CYTH3O43739 400 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 CAPN1P07384 714 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 ATP6V1C1P21283 382 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 GALNT17Q6IS24 598 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 HSPBP1Q9NZL4 362 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 PLA2G4BP0C869 781 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 DR1Q01658 176 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 TWF1Q12792 350 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 BTNL9Q6UXG8 535 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 WRNIP1Q96S55 665 aa18.32■□□□□ 0.52
COL27A1-201ENST00000356083 ZNF496Q96IT1 587 aaPredicted RBP18.32■□□□□ 0.52
COL27A1-201ENST00000356083 MMP19Q99542 508 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms