RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 LPPQ93052 612 aa18.72■□□□□ 0.59
PDLIM7-201ENST00000355572 NAP1L4Q99733 375 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-201ENST00000355572 LLPHQ9BRT6 129 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-201ENST00000355572 PLVAPQ9BX97 442 aa18.72■□□□□ 0.59
PDLIM7-201ENST00000355572 ATP6V0A4Q9HBG4 840 aa18.72■□□□□ 0.59
PDLIM7-201ENST00000355572 MARCH6O60337 910 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 TBX10O75333 385 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 SPATA31C1P0DKV0 1188 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 RBM10P98175 930 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 TRIM29Q14134 588 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 EMC2Q15006 297 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 ZNF174Q15697 407 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 XKR9Q5GH70 373 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 ODR4Q5SWX8 454 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 RNF169Q8NCN4 708 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 FBXO18Q8NFZ0 1043 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 HELQQ8TDG4 1101 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 PRPF31Q8WWY3 499 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 GCOM2Q9BZD3 368 aaPredicted RBP18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 LMAN2LQ9H0V9 348 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 PCDHA12Q9UN75 941 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 COL4A3BPQ9Y5P4 624 aa18.71■□□□□ 0.59
PDLIM7-201ENST00000355572 NCOR1O75376 2440 aa18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 B4GALT3O60512 393 aa18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 MED24O75448 989 aa18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 BAG4O95429 457 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 POLGP54098 1239 aaPredicted RBP18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 ERVFC1P60507 584 aa18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 AAK1Q2M2I8 961 aa18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 CTC1Q2NKJ3 1217 aa18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 LEXMQ3ZCV2 418 aa18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 ZNF410Q86VK4 478 aa18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 PIGOQ8TEQ8 1089 aa18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 PABPC5Q96DU9 382 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 ZSCAN31Q96LW9 406 aaPredicted RBP18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 TMEM117Q9H0C3 514 aa18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 ZSWIM4Q9H7M6 989 aa18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 CLDND1Q9NY35 253 aa18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 TDRD15B5MCY1 1934 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-201ENST00000355572 A0A0U1RQF3 1178 aa18.69■□□□□ 0.58
PDLIM7-201ENST00000355572 EIF5BO60841 1220 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-201ENST00000355572 LYPLA2O95372 231 aa18.69■□□□□ 0.58
PDLIM7-201ENST00000355572 ZSCAN20P17040 1043 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-201ENST00000355572 TOB1P50616 345 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-201ENST00000355572 LAMTOR4Q0VGL1 99 aa18.69■□□□□ 0.58
PDLIM7-201ENST00000355572 CLUL1Q15846 466 aa18.69■□□□□ 0.58
PDLIM7-201ENST00000355572 UBXN11Q5T124 520 aa18.69■□□□□ 0.58
PDLIM7-201ENST00000355572 C4orf32Q8N8J7 132 aa18.69■□□□□ 0.58
PDLIM7-201ENST00000355572 ASAP3Q8TDY4 903 aa18.69■□□□□ 0.58
PDLIM7-201ENST00000355572 IGFLR1Q9H665 355 aa18.69■□□□□ 0.58
PDLIM7-201ENST00000355572 PIN4Q9Y237 131 aaKnown RBP18.69■□□□□ 0.58
PDLIM7-201ENST00000355572 FGF18O76093 207 aa18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 GLP2RO95838 553 aa18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 SRGAP2CP0DJJ0 459 aa18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 HOXA11P31270 313 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 PHKA2P46019 1235 aa18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 DNM2P50570 870 aa18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 AFF1P51825 1210 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 ECM1Q16610 540 aa18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 SPOUT1Q5T280 376 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 EP400NLQ6ZTU2 488 aa18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 FERMT3Q86UX7 667 aa18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 TMEM173Q86WV6 379 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 VN1R2Q8NFZ6 395 aa18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 SH2B1Q9NRF2 756 aaPredicted RBP18.68■□□□□ 0.58
PDLIM7-201ENST00000355572 GRXCR2A6NFK2 248 aa18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 RFC5P40937 340 aa18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 RARRES1P49788 294 aa18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 PTCRAQ6ISU1 281 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 CATSPER4Q7RTX7 472 aa18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 RBM23Q86U06 439 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 CATSPER3Q86XQ3 398 aa18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 IL27Q8NEV9 243 aa18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 SLC7A3Q8WY07 619 aa18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 MTRQ99707 1265 aa18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 FOXP1Q9H334 677 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 GPRC5CQ9NQ84 441 aa18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 AGPAT5Q9NUQ2 364 aa18.67■□□□□ 0.58
PDLIM7-201ENST00000355572 NT5C1B-RDH14C9J2C7 533 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 FSCN2O14926 492 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 PER2O15055 1255 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 DKC1O60832 514 aaKnown RBP eCLIP18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 SFPQP23246 707 aaKnown RBP eCLIP18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 TECP42680 631 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 HMGN5P82970 282 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 ADAM15Q13444 863 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 CAPSQ13938 189 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 RABEP1Q15276 862 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 NAALADL2Q58DX5 795 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 TTC38Q5R3I4 469 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 POTEGQ6S5H5 508 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 NOSTRINQ8IVI9 506 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 FAM178BQ8IXR5 827 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 ZNF710Q8N1W2 664 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 RNF149Q8NC42 400 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 BCL7CQ8WUZ0 217 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 PSPC1Q8WXF1 523 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 TMX3Q96JJ7 454 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 FAM105AQ9NUU6 356 aa18.66■□□□□ 0.58
PDLIM7-201ENST00000355572 CLEC1BQ9P126 229 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms