RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 RGS18Q9NS28 235 aa12.87□□□□□ -0.35
CDRT1-202ENST00000354433 FAM205CA6NFA0 338 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 EML1O00423 815 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 LINC00271P0C7V0 271 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 EIF4BP23588 611 aaKnown RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 PPP2R5CQ13362 524 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 DRP2Q13474 957 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 EARS2Q5JPH6 523 aaKnown RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 B3GNT9Q6UX72 402 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 NOSTRINQ8IVI9 506 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 DIS3L2Q8IYB7 885 aaKnown RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 ABI1Q8IZP0 508 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 ZNF710Q8N1W2 664 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 RNF169Q8NCN4 708 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 LINC00301Q8NCQ3 95 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 PLVAPQ9BX97 442 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 LMAN2LQ9H0V9 348 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 DDX19AQ9NUU7 478 aaKnown RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 CLDND1Q9NY35 253 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 VAV3Q9UKW4 847 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 MYH9P35579 1960 aaKnown RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 A0A1W2PQ27 194 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 A0A1W2PQ64 194 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 A0A1W2PQD8 194 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 H3BQ06 376 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 TBX3O15119 743 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 FGFR1P11362 822 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 FGFR4P22455 802 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 QARSP47897 775 aaKnown RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 POLGP54098 1239 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 STK38Q15208 465 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 FAM102BQ5T8I3 360 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 RHPN2Q8IUC4 686 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 SLFN12Q8IYM2 578 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 SLC7A3Q8WY07 619 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 NLRP4Q96MN2 994 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 JPH2Q9BR39 696 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 LXNQ9BS40 222 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 NIFKQ9BYG3 293 aaKnown RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 GCOM2Q9BZD3 368 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 ADAMTS10Q9H324 1103 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 AAASQ9NRG9 546 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 TMEM161AQ9NX61 479 aa12.86□□□□□ -0.35
CDRT1-202ENST00000354433 MORC2Q9Y6X9 1032 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-202ENST00000354433 TTC3P53804 2025 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 RALGAPA2Q2PPJ7 1873 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 NLRC5Q86WI3 1866 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 REV3LO60673 3130 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 BTBD18B2RXH4 712 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 C9IYK1 514 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 PPP6R2O75170 966 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 CSDE1O75534 798 aaKnown RBP12.85□□□□□ -0.35
CDRT1-202ENST00000354433 P4HBP07237 508 aaKnown RBP12.85□□□□□ -0.35
CDRT1-202ENST00000354433 DARSP14868 501 aaKnown RBP12.85□□□□□ -0.35
CDRT1-202ENST00000354433 SFPQP23246 707 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDRT1-202ENST00000354433 CYP4A11Q02928 519 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 SLC39A14Q15043 492 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 TARBP2Q15633 366 aaKnown RBP12.85□□□□□ -0.35
CDRT1-202ENST00000354433 RILPL1Q5EBL4 403 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 ADALQ6DHV7 355 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 FAM43BQ6ZT52 329 aaPredicted RBP12.85□□□□□ -0.35
CDRT1-202ENST00000354433 ANO5Q75V66 913 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 GAS2L3Q86XJ1 694 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 CRIPAKQ8N1N5 446 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 KLHL23Q8NBE8 558 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 HAS1Q92839 578 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 P2RX5Q93086 422 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 PPP2R3CQ969Q6 453 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 CEP170P1Q96L14 293 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 CCDC43Q96MW1 224 aaKnown RBP12.85□□□□□ -0.35
CDRT1-202ENST00000354433 GRPEL1Q9HAV7 217 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 CYP26B1Q9NR63 512 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 SUCLA2Q9P2R7 463 aaPredicted RBP12.85□□□□□ -0.35
CDRT1-202ENST00000354433 PCDHB12Q9Y5F1 795 aa12.85□□□□□ -0.35
CDRT1-202ENST00000354433 A0A087WZ62 844 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 SYCE3A1L190 88 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 SPTLC2O15270 562 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 HOXA2O43364 376 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 NEMFO60524 1076 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 ITGB1P05556 798 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 ATP2B1P20020 1258 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 YWHABP31946 246 aaKnown RBP12.84□□□□□ -0.35
CDRT1-202ENST00000354433 NPEPPSP55786 919 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 CDC42EP1Q00587 391 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 EPHA7Q15375 998 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 CALCRLQ16602 461 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 THNSL1Q8IYQ7 743 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 POF1BQ8WVV4 589 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 PABPC5Q96DU9 382 aaKnown RBP12.84□□□□□ -0.35
CDRT1-202ENST00000354433 FDXACB1Q9BRP7 624 aaPredicted RBP12.84□□□□□ -0.35
CDRT1-202ENST00000354433 IGFLR1Q9H665 355 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 DACT1Q9NYF0 836 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 PLAGL2Q9UPG8 496 aa12.84□□□□□ -0.35
CDRT1-202ENST00000354433 MAFO75444 373 aaPredicted RBP12.83□□□□□ -0.36
CDRT1-202ENST00000354433 CEBPZQ03701 1054 aaKnown RBP12.83□□□□□ -0.36
CDRT1-202ENST00000354433 CTTNQ14247 550 aaKnown RBP12.83□□□□□ -0.36
CDRT1-202ENST00000354433 DSC3Q14574 896 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 SF3A1Q15459 793 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms