RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 GLYCTKQ8IVS8 523 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 PROM2Q8N271 834 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 DRAXINQ8NBI3 349 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-201ENST00000352993 PPFIBP2Q8ND30 876 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 SLC35G2Q8TBE7 412 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 DTX3LQ8TDB6 740 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 PLA2G12BQ9BX93 195 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 LRRC27Q9C0I9 530 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 MYLK2Q9H1R3 596 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 BLOC1S4Q9NUP1 217 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 BSDC1Q9NW68 430 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-201ENST00000352993 CYP39A1Q9NYL5 469 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 PARP2Q9UGN5 583 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 ASIC3Q9UHC3 531 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 USH1CQ9Y6N9 552 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 LY75O60449 1722 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 LAMB4A4D0S4 1761 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 DDX60Q8IY21 1712 aaKnown RBP8.22□□□□□ -1.09
BRCA1-201ENST00000352993 ABCB11O95342 1321 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 FAM187AA6NFU0 413 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 RIPK2O43353 540 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 STARD3NLO95772 234 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 GNA14O95837 355 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 SKIP12755 728 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 KLRC3Q07444 240 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 MAPK7Q13164 816 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 PPP2R5EQ16537 467 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 SUPT20HQ8NEM7 779 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 ZCRB1Q8TBF4 217 aaKnown RBP8.22□□□□□ -1.09
BRCA1-201ENST00000352993 MMTAG2Q9BU76 263 aaKnown RBP8.22□□□□□ -1.09
BRCA1-201ENST00000352993 NT5C3AQ9H0P0 336 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 TMEM260Q9NX78 707 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 STK17AQ9UEE5 414 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 MEGF6O75095 1541 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 NPHP3-ACAD11A0A0J9YXS1 232 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 O00370 1275 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 KIAA0391O15091 583 aaKnown RBP8.21□□□□□ -1.09
BRCA1-201ENST00000352993 UBTFL6P0CB48 400 aaPredicted RBP8.21□□□□□ -1.09
BRCA1-201ENST00000352993 GNA11P29992 359 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 DIXDC1Q155Q3 683 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 TRIP13Q15645 432 aaPredicted RBP8.21□□□□□ -1.09
BRCA1-201ENST00000352993 SLC5A9Q2M3M2 681 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 CCDC137Q6PK04 289 aaKnown RBP8.21□□□□□ -1.09
BRCA1-201ENST00000352993 ECHDC2Q86YB7 292 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 CCDC65Q8IXS2 484 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 FAM13CQ8NE31 585 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 TBC1D16Q8TBP0 767 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 RAD54LQ92698 747 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 DDX17Q92841 729 aaKnown RBP8.21□□□□□ -1.09
BRCA1-201ENST00000352993 KIFAP3Q92845 792 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 GJA10Q969M2 543 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 FAM210AQ96ND0 272 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 RUNDC3BQ96NL0 473 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 NUDT12Q9BQG2 462 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 CRNKL1Q9BZJ0 848 aaKnown RBP8.21□□□□□ -1.09
BRCA1-201ENST00000352993 EPB41L4BQ9H329 900 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 SH3GLB2Q9NR46 395 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 ZDHHC18Q9NUE0 388 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 CTTNBP2NLQ9P2B4 639 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 ANAPC4Q9UJX5 808 aa8.21□□□□□ -1.09
BRCA1-201ENST00000352993 RGPD5Q99666 1765 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 USP17L3A6NCW0 530 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 USP17L4A6NCW7 530 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 CREB3O43889 395 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 CBX6O95503 412 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 TSPY3P0CV98 308 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 TSPY8P0CW00 308 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 TPBGLP0DKB5 382 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 XRCC5P13010 732 aaKnown RBP8.21□□□□□ -1.1
BRCA1-201ENST00000352993 STAT1P42224 750 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 TNNI2P48788 182 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 CCDC152Q4G0S7 254 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 MEX3CQ5U5Q3 659 aaKnown RBP8.21□□□□□ -1.1
BRCA1-201ENST00000352993 ARHGEF18Q6ZSZ5 1173 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 RFX8Q6ZV50 586 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 USP17L1Q7RTZ2 530 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 IRF2BP2Q7Z5L9 587 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 TRIM74Q86UV6 250 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 TRIM73Q86UV7 250 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 AGGF1Q8N302 714 aaeCLIP8.21□□□□□ -1.1
BRCA1-201ENST00000352993 WDR35Q9P2L0 1181 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 STOML1Q9UBI4 398 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 LRRC42Q9Y546 428 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 PCDHB13Q9Y5F0 798 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 RPTORQ8N122 1335 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 ZNF831Q5JPB2 1677 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 hCG_2014768A0A024R1R8 64 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 KLRF2D3W0D1 207 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 MAPK13O15264 365 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 THAP12O43422 761 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 ATP9AO75110 1047 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 PEX11AO75192 247 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 SPAG7O75391 227 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 NPTXRO95502 500 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 TNFAIP3P21580 790 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 FGFR2P21802 821 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 RASSF2P50749 326 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 DNAJC3Q13217 504 aa8.21□□□□□ -1.1
BRCA1-201ENST00000352993 TRIM28Q13263 835 aaKnown RBP8.21□□□□□ -1.1
BRCA1-201ENST00000352993 DHX34Q14147 1143 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms